/****************************************************************************** ** @source AJAX variation database functions ** ** These functions control all aspects of AJAX variation database access ** ** @author Copyright (C) 2010 Peter Rice ** @version 1.0 ** @modified Oct 2010 pmr first version ** @@ ** ** This library is free software; you can redistribute it and/or ** modify it under the terms of the GNU Library General Public ** License as published by the Free Software Foundation; either ** version 2 of the License, or (at your option) any later version. ** ** This library is distributed in the hope that it will be useful, ** but WITHOUT ANY WARRANTY; without even the implied warranty of ** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU ** Library General Public License for more details. ** ** You should have received a copy of the GNU Library General Public ** License along with this library; if not, write to the ** Free Software Foundation, Inc., 59 Temple Place - Suite 330, ** Boston, MA 02111-1307, USA. ******************************************************************************/ #include "ajax.h" #include "ajvardb.h" #include #include #include #ifndef WIN32 #include #include #include #include #include #include #else #include #include #endif #include #include /* @funclist varAccess ****************************************************** ** ** Functions to access each database or variation access method ** ******************************************************************************/ static AjOVarAccess varAccess[] = { /* Name AccessFunction FreeFunction Qlink Description Alias Entry Query All Chunk */ {NULL, NULL, NULL, NULL, NULL, AJFALSE, AJFALSE, AJFALSE, AJFALSE, AJFALSE}, {NULL, NULL, NULL, NULL, NULL, AJFALSE, AJFALSE, AJFALSE, AJFALSE, AJFALSE} }; /* @func ajVardbInit ******************************************************** ** ** Initialise variation database internals ** ** @return [void] ******************************************************************************/ void ajVardbInit(void) { AjPTable table; ajuint i = 0; table = ajVaraccessGetDb(); while(varAccess[i].Name) { ajCallTableRegister(table, varAccess[i].Name, (void*) &varAccess[i]); i++; } return; } /* @func ajVardbPrintAccess ************************************************** ** ** Reports the internal data structures ** ** @param [u] outf [AjPFile] Output file ** @param [r] full [AjBool] Full report (usually ajFalse) ** @return [void] ** @@ ******************************************************************************/ void ajVardbPrintAccess(AjPFile outf, AjBool full) { ajint i = 0; ajFmtPrintF(outf, "\n"); ajFmtPrintF(outf, "# Variation access methods\n"); ajFmtPrintF(outf, "# Name Alias Entry Query All Description\n"); ajFmtPrintF(outf, "\n"); ajFmtPrintF(outf, "method {\n"); for(i=0; varAccess[i].Name; i++) if(full || !varAccess[i].Alias) ajFmtPrintF(outf, " %-10s %5B %5B %5B %5B \"%s\"\n", varAccess[i].Name, varAccess[i].Alias, varAccess[i].Entry, varAccess[i].Query, varAccess[i].All, varAccess[i].Desc); ajFmtPrintF(outf, "}\n\n"); return; } /* @func ajVardbExit ******************************************************** ** ** Cleans up variation database processing internal memory ** ** @return [void] ** @@ ******************************************************************************/ void ajVardbExit(void) { return; }