descseq

Function

Description

descseq reads a sequence and writes it to file but with a different name and / or description. All other records including the sequence itself are left unaltered.

Usage

Command line arguments


Input file format

descseq reads a single nucleotide or protein sequence.

Output file format

descseq writes the sequence file with a changed name or description.

Data files

None.

Notes

Most sequence formats allow, at the very minimum, a name for the sequence and some comments to be stored in the sequence file. descseq let's you change the sequence name and / or description, and is far more convenient and less error-prone than using the editor for editing.

The default action is to replace the existing name or description with your new one, but by using the qualifier -append what you enter is appended to the existing name or description. Note that if you append to a description, no space is inserted by default bewteen the existing description and your appended text. You have to put in a space yourself if you require one.

References

None.

Warnings

None.

Diagnostic Error Messages

None.

Exit status

It always exits with status 0.

Known bugs

None noted.

Author(s)

History

Target users

Comments