/*****************************************************************************
#   Copyright (C) 1994-2008 by David Gordon.
#   All rights reserved.                           
#                                                                           
#   This software is part of a beta-test version of the Consed/Autofinish
#   package.  It should not be redistributed or
#   used for any commercial purpose, including commercially funded
#   sequencing, without written permission from the author and the
#   University of Washington.
#   
#   This software is provided ``AS IS'' and any express or implied
#   warranties, including, but not limited to, the implied warranties of
#   merchantability and fitness for a particular purpose, are disclaimed.
#   In no event shall the authors or the University of Washington be
#   liable for any direct, indirect, incidental, special, exemplary, or
#   consequential damages (including, but not limited to, procurement of
#   substitute goods or services; loss of use, data, or profits; or
#   business interruption) however caused and on any theory of liability,
#   whether in contract, strict liability, or tort (including negligence
#   or otherwise) arising in any way out of the use of this software, even
#   if advised of the possibility of such damage.
#
#   Building Consed from source is error prone and not simple which is
#   why I provide executables.  Due to time limitations I cannot
#   provide any assistance in building Consed.  Even if you do not
#   modify the source, you may introduce errors due to using a
#   different version of the compiler, a different version of motif,
#   different versions of other libraries than I used, etc.  For this
#   reason, if you discover Consed bugs, I can only offer help with
#   those bugs if you first reproduce those bugs with an executable
#   provided by me--not an executable you have built.
# 
#   Modifying Consed is also difficult.  Although Consed is modular,
#   some modules are used by many other modules.  Thus making a change
#   in one place can have unforeseen effects on many other features.
#   It may takes months for you to notice these other side-effects
#   which may not seen connected at all.  It is not feasable for me to
#   provide help with modifying Consed sources because of the
#   potentially huge amount of time involved.
#
#*****************************************************************************/
#include    "consedResources.h"
#include    "rwcstring.h"


RWCString consedResources :: soGetResources() {

   RWCString soAllResources( (RWSize_2T) 20000 );

   soAllResources = "";


   soAllResources = soAllResources + "consed.showProteinTranslation: " +
      ( bShowProteinTranslation_ ? "true" : "false" ) + "\n";
   soAllResources = soAllResources + "consed.colorHighlightBackground: " +
      soColorHighlightBackground_ + "\n";

   soAllResources = soAllResources + "consed.colorHighlightForegroundX: " +
      soColorHighlightForegroundX_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansMatch_same: " +
      soColorMeansMatch_same_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansMatch_different: " +
      soColorMeansMatch_different_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansMatch_clippedEnds: " +
      soColorMeansMatch_clippedEnds_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansMatch_consensus: " +
      soColorMeansMatch_consensus_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansMatch_lowQualConsensus: " +
      soColorMeansMatch_lowQualConsensus_ + "\n";

   soAllResources = soAllResources + "consed.colorConsensusLabel: " +
      soColorConsensusLabel_ + "\n";

   soAllResources = soAllResources + "consed.colorConsensusLabelBackground: " +
      soColorConsensusLabelBackground_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQualityAgree: " +
      soColorMeansQualityAgree_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQualityDisagree: " +
      soColorMeansQualityDisagree_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQualityConsensusForeground: " +
      soColorMeansQualityConsensusForeground_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality0_4: " +
      soColorMeansQuality0_4_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality5_9: " +
      soColorMeansQuality5_9_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality10_14: " +
      soColorMeansQuality10_14_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality15_19: " +
      soColorMeansQuality15_19_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality20_24: " +
      soColorMeansQuality20_24_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality25_29: " +
      soColorMeansQuality25_29_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality30_34: " +
      soColorMeansQuality30_34_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality35_39: " +
      soColorMeansQuality35_39_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality40_97: " +
      soColorMeansQuality40_97_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality98: " +
      soColorMeansQuality98_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansQuality99: " +
      soColorMeansQuality99_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansEditedAgree: " +
      soColorMeansEditedAgree_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansEditedDisagree: " +
      soColorMeansEditedDisagree_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansEditedUnedited: " +
      soColorMeansEditedUnedited_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansEdited98: " +
      soColorMeansEdited98_ + "\n";

   soAllResources = soAllResources + "consed.colorMeansEdited99: " +
      soColorMeansEdited99_ + "\n";

   soAllResources = soAllResources + "consed.colorVerticalScrollbarScrolledDown: " +
      soColorVerticalScrollbarScrolledDown_ + "\n";

   soAllResources = soAllResources + "consed.colorMode_editCursorForeground: " +
      soColorMode_editCursorForeground_ + "\n";

   soAllResources = soAllResources + "consed.colorMode_editCursorBackground: " +
      soColorMode_editCursorBackground_ + "\n";

   soAllResources = soAllResources + "consed.colorTracesA: " +
      soColorTracesA_ + "\n";

   soAllResources = soAllResources + "consed.colorTracesC: " +
      soColorTracesC_ + "\n";

   soAllResources = soAllResources + "consed.colorTracesG: " +
      soColorTracesG_ + "\n";

   soAllResources = soAllResources + "consed.colorTracesT: " +
      soColorTracesT_ + "\n";

   soAllResources = soAllResources + "consed.colorTracesN: " +
      soColorTracesN_ + "\n";

   soAllResources = soAllResources + "consed.colorTracesPad: " +
      soColorTracesPad_ + "\n";

   soAllResources = soAllResources + "consed.colorScale: " +
      soColorScale_ + "\n";

   soAllResources = soAllResources + "consed.colorScaleBackground: " +
      soColorScaleBackground_ + "\n";

   soAllResources = soAllResources + "consed.colorHighlightedReadNames: " +
      soColorHighlightedReadNames_ + "\n";

   soAllResources = soAllResources + "consed.colorSequencingDirectionArrow: " +
      soColorSequencingDirectionArrow_ + "\n";

   soAllResources = soAllResources + "consed.colorSequencingDirectionArrowTracesUp: " +
      soColorSequencingDirectionArrowTracesUp_ + "\n";

   soAllResources = soAllResources + "consed.colorVerticalLineAtCursor: " +
      soColorVerticalLineAtCursor_ + "\n";

   soAllResources = soAllResources + "consed.colorHorizontalLineAtCursor: " +
      soColorHorizontalLineAtCursor_ + "\n";

   soAllResources = soAllResources + "consed.colorProteinTranslation: " +
      soColorProteinTranslation_ + "\n";

   soAllResources = soAllResources + "consed.colorProteinTranslationLabels: " +
      soColorProteinTranslationLabels_ + "\n";

   soAllResources = soAllResources + "consed.colorProteinStartCodon: " +
      soColorProteinStartCodon_ + "\n";

   soAllResources = soAllResources + "consed.colorProteinStopCodon: " +
      soColorProteinStopCodon_ + "\n";

   soAllResources = soAllResources + "consed.colorUnmatchedRestrictionFragment: " +
      soColorUnmatchedRestrictionFragment_ + "\n";

   soAllResources = soAllResources + "consed.colorRestrictionFragmentPairTooFarApart: " +
      soColorRestrictionFragmentPairTooFarApart_ + "\n";

   soAllResources = soAllResources + "consed.colorRestrictionFragmentInContig: " +
      soColorRestrictionFragmentInContig_ + "\n";

   soAllResources = soAllResources + "consed.colorRestrictionFragmentPartlyOffContig: " +
      soColorRestrictionFragmentPartlyOffContig_ + "\n";

   soAllResources = soAllResources + "consed.colorRestrictionFragmentEntirelyOffContig: " +
      soColorRestrictionFragmentEntirelyOffContig_ + "\n";

   soAllResources = soAllResources + "consed.colorActualGelRestrictionFragment: " +
      soColorActualGelRestrictionFragment_ + "\n";

   soAllResources = soAllResources + "consed.colorRestrictionDigestScale: " +
      soColorRestrictionDigestScale_ + "\n";

   soAllResources = soAllResources + "consed.colorRestrictionDigestCursorIndicator: " +
      soColorRestrictionDigestCursorIndicator_ + "\n";

   soAllResources = soAllResources + "consed.colorRestrictionFragmentsOnTopOfEachOther: " +
      soColorRestrictionFragmentsOnTopOfEachOther_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewScale: " +
      soColorAssemblyViewScale_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewScaleNumbers: " +
      soColorAssemblyViewScaleNumbers_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewContigs: " +
      soColorAssemblyViewContigs_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewContigNamesForeground: " +
      soColorAssemblyViewContigNamesForeground_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewContigNamesBackground: " +
      soColorAssemblyViewContigNamesBackground_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentFwdRevPairs: " +
      soColorAssemblyViewConsistentFwdRevPairs_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentFwdRevPairDepth: " +
      soColorAssemblyViewConsistentFwdRevPairDepth_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewReadDepth: " +
      soColorAssemblyViewReadDepth_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewDiscrepanciesNotIndels: " +
      soColorAssemblyViewDiscrepanciesNotIndels_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewDiscrepanciesIndels: " +
      soColorAssemblyViewDiscrepanciesIndels_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewTooFewConsistentFwdRevPairs: " +
      soColorAssemblyViewTooFewConsistentFwdRevPairs_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewInconsistentFwdRevPair: " +
      soColorAssemblyViewInconsistentFwdRevPair_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentGapSpanningFwdRevPair: " +
      soColorAssemblyViewConsistentGapSpanningFwdRevPair_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewHighlight: " +
      soColorAssemblyViewHighlight_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewMultipleItemsOnTopOfEachOther: " +
      soColorAssemblyViewMultipleItemsOnTopOfEachOther_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewDirectSequenceMatches: " +
      soColorAssemblyViewDirectSequenceMatches_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewInvertedSequenceMatches: " +
      soColorAssemblyViewInvertedSequenceMatches_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment1: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment1_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment2: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment2_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment3: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment3_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment4: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment4_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment5: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment5_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment6: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment6_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment7: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment7_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment8: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment8_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment9: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment9_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewConsistentRestrictionDigestFragment10: " +
      soColorAssemblyViewConsistentRestrictionDigestFragment10_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewInconsistentRestrictionDigestFragment: " +
      soColorAssemblyViewInconsistentRestrictionDigestFragment_ + "\n";

   soAllResources = soAllResources + "consed.colorAssemblyViewCloneEnd: " +
      soColorAssemblyViewCloneEnd_ + "\n";

   soAllResources = soAllResources + "consed.colorReadPrefixDefault: " +
      soColorReadPrefixDefault_ + "\n";

   soAllResources = soAllResources + "consed.tagColorEdit: " +
      soTagColorEdit_ + "\n";

   soAllResources = soAllResources + "consed.tagColorBecomeConsensus: " +
      soTagColorBecomeConsensus_ + "\n";

   soAllResources = soAllResources + "consed.tagColorIgnoreMismatches: " +
      soTagColorIgnoreMismatches_ + "\n";

   soAllResources = soAllResources + "consed.tagColorIgnoreMatches: " +
      soTagColorIgnoreMatches_ + "\n";

   soAllResources = soAllResources + "consed.tagColorSignificantDiscrepancy: " +
      soTagColorSignificantDiscrepancy_ + "\n";

   soAllResources = soAllResources + "consed.tagColorCompression: " +
      soTagColorCompression_ + "\n";

   soAllResources = soAllResources + "consed.tagColorDataNeeded: " +
      soTagColorDataNeeded_ + "\n";

   soAllResources = soAllResources + "consed.tagColorComment: " +
      soTagColorComment_ + "\n";

   soAllResources = soAllResources + "consed.tagColorTagsOverlap: " +
      soTagColorTagsOverlap_ + "\n";

   soAllResources = soAllResources + "consed.tagColorSequencingVector: " +
      soTagColorSequencingVector_ + "\n";

   soAllResources = soAllResources + "consed.tagColorCloningVector: " +
      soTagColorCloningVector_ + "\n";

   soAllResources = soAllResources + "consed.tagColorVector: " +
      soTagColorVector_ + "\n";

   soAllResources = soAllResources + "consed.tagColorOligo: " +
      soTagColorOligo_ + "\n";

   soAllResources = soAllResources + "consed.tagColorOligo3PrimeEnd: " +
      soTagColorOligo3PrimeEnd_ + "\n";

   soAllResources = soAllResources + "consed.tagColorChimera: " +
      soTagColorChimera_ + "\n";

   soAllResources = soAllResources + "consed.tagColorContigName: " +
      soTagColorContigName_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolymorphism: " +
      soTagColorPolymorphism_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHomozygoteAA: " +
      soTagColorHomozygoteAA_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHomozygoteCC: " +
      soTagColorHomozygoteCC_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHomozygoteGG: " +
      soTagColorHomozygoteGG_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHomozygoteTT: " +
      soTagColorHomozygoteTT_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHeterozygoteAC: " +
      soTagColorHeterozygoteAC_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHeterozygoteAG: " +
      soTagColorHeterozygoteAG_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHeterozygoteAT: " +
      soTagColorHeterozygoteAT_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHeterozygoteCG: " +
      soTagColorHeterozygoteCG_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHeterozygoteCT: " +
      soTagColorHeterozygoteCT_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHeterozygoteGT: " +
      soTagColorHeterozygoteGT_ + "\n";

   soAllResources = soAllResources + "consed.tagColorRepeat: " +
      soTagColorRepeat_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolyPhredRank1: " +
      soTagColorPolyPhredRank1_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolyPhredRank2: " +
      soTagColorPolyPhredRank2_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolyPhredRank3: " +
      soTagColorPolyPhredRank3_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolyPhredRank4: " +
      soTagColorPolyPhredRank4_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolyPhredRank5: " +
      soTagColorPolyPhredRank5_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolyPhredRank6: " +
      soTagColorPolyPhredRank6_ + "\n";

   soAllResources = soAllResources + "consed.tagColorIndelSite: " +
      soTagColorIndelSite_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHeterozygoteIndel: " +
      soTagColorHeterozygoteIndel_ + "\n";

   soAllResources = soAllResources + "consed.tagColorHomozygoteIndel: " +
      soTagColorHomozygoteIndel_ + "\n";

   soAllResources = soAllResources + "consed.tagColorPolymorphismConfirmed: " +
      soTagColorPolymorphismConfirmed_ + "\n";

   soAllResources = soAllResources + "consed.tagColorMatchElsewhereHighQual: " +
      soTagColorMatchElsewhereHighQual_ + "\n";

   soAllResources = soAllResources + "consed.tagColorMatchElsewhereLowQual: " +
      soTagColorMatchElsewhereLowQual_ + "\n";

   soAllResources = soAllResources + "consed.tagColorG_dropout: " +
      soTagColorG_dropout_ + "\n";

   soAllResources = soAllResources + "consed.tagColorMarkedHighQuality: " +
      soTagColorMarkedHighQuality_ + "\n";

   soAllResources = soAllResources + "consed.tagColorMarkedLowQuality: " +
      soTagColorMarkedLowQuality_ + "\n";

   soAllResources = soAllResources + "consed.tagColorAutoFinishExp: " +
      soTagColorAutoFinishExp_ + "\n";

   soAllResources = soAllResources + "consed.tagColorDoNotFinish: " +
      soTagColorDoNotFinish_ + "\n";

   soAllResources = soAllResources + "consed.tagColorDoNotDoPCR: " +
      soTagColorDoNotDoPCR_ + "\n";

   soAllResources = soAllResources + "consed.tagColorConsedFixedGoldenPath: " +
      soTagColorConsedFixedGoldenPath_ + "\n";

   soAllResources = soAllResources + "consed.tagColorCloneEnd: " +
      soTagColorCloneEnd_ + "\n";

   soAllResources = soAllResources + "consed.tagColorEditable: " +
      soTagColorEditable_ + "\n";

   soAllResources = soAllResources + "consed.tagColorContigEndPair: " +
      soTagColorContigEndPair_ + "\n";

   soAllResources = soAllResources + "consed.tagColorChangedGenotype: " +
      soTagColorChangedGenotype_ + "\n";

   soAllResources = soAllResources + "consed.tagColorStartNumberingConsensus: " +
      soTagColorStartNumberingConsensus_ + "\n";

   soAllResources = soAllResources + "consed.tagColorReferenceSequence: " +
      soTagColorReferenceSequence_ + "\n";

   soAllResources = soAllResources + "consed.tagColorJoin: " +
      soTagColorJoin_ + "\n";

   soAllResources = soAllResources + "consed.customTag1: " +
      soCustomTag1_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag1: " +
      soTagColorCustomTag1_ +  "\n";

   soAllResources = soAllResources + "consed.customTag2: " +
      soCustomTag2_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag2: " +
      soTagColorCustomTag2_ +  "\n";

   soAllResources = soAllResources + "consed.customTag3: " +
      soCustomTag3_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag3: " +
      soTagColorCustomTag3_ +  "\n";

   soAllResources = soAllResources + "consed.customTag4: " +
      soCustomTag4_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag4: " +
      soTagColorCustomTag4_ +  "\n";

   soAllResources = soAllResources + "consed.customTag5: " +
      soCustomTag5_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag5: " +
      soTagColorCustomTag5_ +  "\n";

   soAllResources = soAllResources + "consed.customTag6: " +
      soCustomTag6_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag6: " +
      soTagColorCustomTag6_ +  "\n";

   soAllResources = soAllResources + "consed.customTag7: " +
      soCustomTag7_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag7: " +
      soTagColorCustomTag7_ +  "\n";

   soAllResources = soAllResources + "consed.customTag8: " +
      soCustomTag8_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag8: " +
      soTagColorCustomTag8_ +  "\n";

   soAllResources = soAllResources + "consed.customTag9: " +
      soCustomTag9_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag9: " +
      soTagColorCustomTag9_ +  "\n";

   soAllResources = soAllResources + "consed.customTag10: " +
      soCustomTag10_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag10: " +
      soTagColorCustomTag10_ +  "\n";

   soAllResources = soAllResources + "consed.customTag11: " +
      soCustomTag11_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag11: " +
      soTagColorCustomTag11_ +  "\n";

   soAllResources = soAllResources + "consed.customTag12: " +
      soCustomTag12_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag12: " +
      soTagColorCustomTag12_ +  "\n";

   soAllResources = soAllResources + "consed.customTag13: " +
      soCustomTag13_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag13: " +
      soTagColorCustomTag13_ +  "\n";

   soAllResources = soAllResources + "consed.customTag14: " +
      soCustomTag14_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag14: " +
      soTagColorCustomTag14_ +  "\n";

   soAllResources = soAllResources + "consed.customTag15: " +
      soCustomTag15_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomTag15: " +
      soTagColorCustomTag15_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag1: " +
      soCustomConsensusTag1_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag1: " +
      soTagColorCustomConsensusTag1_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag2: " +
      soCustomConsensusTag2_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag2: " +
      soTagColorCustomConsensusTag2_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag3: " +
      soCustomConsensusTag3_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag3: " +
      soTagColorCustomConsensusTag3_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag4: " +
      soCustomConsensusTag4_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag4: " +
      soTagColorCustomConsensusTag4_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag5: " +
      soCustomConsensusTag5_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag5: " +
      soTagColorCustomConsensusTag5_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag6: " +
      soCustomConsensusTag6_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag6: " +
      soTagColorCustomConsensusTag6_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag7: " +
      soCustomConsensusTag7_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag7: " +
      soTagColorCustomConsensusTag7_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag8: " +
      soCustomConsensusTag8_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag8: " +
      soTagColorCustomConsensusTag8_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag9: " +
      soCustomConsensusTag9_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag9: " +
      soTagColorCustomConsensusTag9_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag10: " +
      soCustomConsensusTag10_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag10: " +
      soTagColorCustomConsensusTag10_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag11: " +
      soCustomConsensusTag11_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag11: " +
      soTagColorCustomConsensusTag11_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag12: " +
      soCustomConsensusTag12_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag12: " +
      soTagColorCustomConsensusTag12_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag13: " +
      soCustomConsensusTag13_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag13: " +
      soTagColorCustomConsensusTag13_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag14: " +
      soCustomConsensusTag14_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag14: " +
      soTagColorCustomConsensusTag14_ +  "\n";

   soAllResources = soAllResources + "consed.customConsensusTag15: " +
      soCustomConsensusTag15_ +  "\n";

   soAllResources = soAllResources + "consed.tagColorCustomConsensusTag15: " +
      soTagColorCustomConsensusTag15_ +  "\n";

   soAllResources = soAllResources + "consed.printPS: " +
      ( bPrintPS_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.defaultTagType: " +
      soDefaultTagType_  + "\n";

   soAllResources = soAllResources + "consed.defaultTagOnConsensusNotReads: " +
      ( bDefaultTagOnConsensusNotReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMinNumberOfErrorsFixedByAnExp: " +
      RWCString( (double) dAutoFinishMinNumberOfErrorsFixedByAnExp_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishRedundancy: " +
      RWCString( (double) dAutoFinishRedundancy_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAverageInsertSize: " +
      RWCString( (long) nAutoFinishAverageInsertSize_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxInsertSizeOfASubclone: " +
      RWCString( (long) nPrimersMaxInsertSizeOfASubclone_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxMeltingTemp: " +
      RWCString( (long) nPrimersMaxMeltingTemp_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxMeltingTempForPCR: " +
      RWCString( (long) nPrimersMaxMeltingTempForPCR_ )  + "\n";

   soAllResources = soAllResources + "consed.primersPickTemplatesForPrimers: " +
      ( bPrimersPickTemplatesForPrimers_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersSubcloneFullPathnameOfFileOfSequencesForScreening: " +
      soPrimersSubcloneFullPathnameOfFileOfSequencesForScreening_  + "\n";

   soAllResources = soAllResources + "consed.primersCloneFullPathnameOfFileOfSequencesForScreening: " +
      soPrimersCloneFullPathnameOfFileOfSequencesForScreening_  + "\n";

   soAllResources = soAllResources + "consed.primersMinMeltingTemp: " +
      RWCString( (long) nPrimersMinMeltingTemp_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMinMeltingTempForPCR: " +
      RWCString( (long) nPrimersMinMeltingTempForPCR_ )  + "\n";

   soAllResources = soAllResources + "consed.searchFunctionsUseUnalignedEndsOfReads: " +
      ( bSearchFunctionsUseUnalignedEndsOfReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.searchFunctionsUseLowQualityEndsOfReads: " +
      ( bSearchFunctionsUseLowQualityEndsOfReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.inexactSearchForStringMaxPerCentMismatch: " +
      RWCString( (long) nInexactSearchForStringMaxPerCentMismatch_ )  + "\n";

   soAllResources = soAllResources + "consed.onlyAllowOneReadWriteConsedAtATime: " +
      ( bOnlyAllowOneReadWriteConsedAtATime_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowHighQualityDiscrepanciesInTemplateIfConsistentForwardReversePair: " +
      ( bAutoFinishAllowHighQualityDiscrepanciesInTemplateIfConsistentForwardReversePair_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.printWindowCommand: " +
      soPrintWindowCommand_  + "\n";

   soAllResources = soAllResources + "consed.fileOfTagTypes: " +
      filFileOfTagTypes_  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowConsistentFwdRevPairs: " +
      ( bAssemblyViewShowConsistentFwdRevPairs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowConsistentFwdRevPairDepth: " +
      ( bAssemblyViewShowConsistentFwdRevPairDepth_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowConsistentFwdRevPairsBetweenDifferentScaffolds: " +
      ( bAssemblyViewShowConsistentFwdRevPairsBetweenDifferentScaffolds_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowLegsOnSquaresForConsistentFwdRevPairs: " +
      ( bAssemblyViewShowLegsOnSquaresForConsistentFwdRevPairs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowGapSpanningFwdRevPairs: " +
      ( bAssemblyViewShowGapSpanningFwdRevPairs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowWhichInconsistentFwdRevPairs: " +
      soAssemblyViewShowWhichInconsistentFwdRevPairs_  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowReadDepth: " +
      ( bAssemblyViewShowReadDepth_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowMultipleHighQualityDiscrepancies: " +
      ( bAssemblyViewShowMultipleHighQualityDiscrepancies_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowRestrictionDigestCutSites: " +
      ( bAssemblyViewShowRestrictionDigestCutSites_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewFilterSequenceMatchesBySize: " +
      ( bAssemblyViewFilterSequenceMatchesBySize_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewSequenceMatchesMinSize: " +
      RWCString( (long) nAssemblyViewSequenceMatchesMinSize_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewSequenceMatchesMaxSize: " +
      RWCString( (long) nAssemblyViewSequenceMatchesMaxSize_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewAutomaticallyStartWithConsed: " +
      ( bAssemblyViewAutomaticallyStartWithConsed_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewDisplayTheseTagTypesOnTheseLines: " +
      soAssemblyViewDisplayTheseTagTypesOnTheseLines_  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowTags: " +
      ( bAssemblyViewShowTags_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoEditRecalculateHighQualitySegmentsOfReads: " +
      ( bAutoEditRecalculateHighQualitySegmentsOfReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoEditConvertCloneEndBasesToXs: " +
      ( bAutoEditConvertCloneEndBasesToXs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoEditTellPhrapNotToOverlapMultiplyDiscrepantReads: " +
      ( bAutoEditTellPhrapNotToOverlapMultiplyDiscrepantReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoEditTagEditableLowConsensusQualityRegions: " +
      ( bAutoEditTagEditableLowConsensusQualityRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoEditMakeFakeRead: " +
      ( bAutoEditMakeFakeRead_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoEditMakeFakeReadFromRead1: " +
      soAutoEditMakeFakeReadFromRead1_  + "\n";

   soAllResources = soAllResources + "consed.autoEditMakeFakeReadFromRead2: " +
      soAutoEditMakeFakeReadFromRead2_  + "\n";

   soAllResources = soAllResources + "consed.autoEditMakeFakeReadName: " +
      soAutoEditMakeFakeReadName_  + "\n";

   soAllResources = soAllResources + "consed.autoEditMakeFakeReadFastaFilename: " +
      filAutoEditMakeFakeReadFastaFilename_  + "\n";

   soAllResources = soAllResources + "consed.autoEditMergeAssembly: " +
      ( bAutoEditMergeAssembly_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoEditSecondaryAceFile: " +
      filAutoEditSecondaryAceFile_  + "\n";

   soAllResources = soAllResources + "consed.autoEditFixRunsInConsensus: " +
      ( bAutoEditFixRunsInConsensus_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.showAllTracesJustShowGoodTraces: " +
      ( bShowAllTracesJustShowGoodTraces_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.addAlignedSequenceQualityOfBases: " +
      RWCString( (long) nAddAlignedSequenceQualityOfBases_ )  + "\n";

   soAllResources = soAllResources + "consed.makeLightBackgroundInAlignedReadsWindowAndTracesWindow: " +
      ( bMakeLightBackgroundInAlignedReadsWindowAndTracesWindow_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.putVerticalLineAtCursor: " +
      ( bPutVerticalLineAtCursor_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.putHorizontalLineAtCursor: " +
      ( bPutHorizontalLineAtCursor_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.highlightedReadsFile: " +
      filHighlightedReadsFile_  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintReadNamesInRegion: " +
      ( bAutoReportPrintReadNamesInRegion_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintReadNamesInRegionContig: " +
      soAutoReportPrintReadNamesInRegionContig_  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintReadNamesInRegionLeftPos: " +
      RWCString( (long) nAutoReportPrintReadNamesInRegionLeftPos_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintReadNamesInRegionRightPos: " +
      RWCString( (long) nAutoReportPrintReadNamesInRegionRightPos_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintHighlyDiscrepantRegions: " +
      ( bAutoReportPrintHighlyDiscrepantRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintScaffolds: " +
      ( bAutoReportPrintScaffolds_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.numberUnpaddedConsensusAtUserDefined: " +
      ( bNumberUnpaddedConsensusAtUserDefined_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintHighQualityDiscrepancies: " +
      ( bAutoReportPrintHighQualityDiscrepancies_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportHighQualityDiscrepanciesExcludeCompressionOrG_dropoutTags: " +
      ( bAutoReportHighQualityDiscrepanciesExcludeCompressionOrG_dropoutTags_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportHighQualityDiscrepanciesExcludeMostPads: " +
      ( bAutoReportHighQualityDiscrepanciesExcludeMostPads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintLowConsensusQualityRegions: " +
      ( bAutoReportPrintLowConsensusQualityRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintSingleSubcloneRegions: " +
      ( bAutoReportPrintSingleSubcloneRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintSingleStrandedRegions: " +
      ( bAutoReportPrintSingleStrandedRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintLinkingForwardReversePairs: " +
      ( bAutoReportPrintLinkingForwardReversePairs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintFilteredInconsistentForwardReversePairs: " +
      ( bAutoReportPrintFilteredInconsistentForwardReversePairs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintAssemblySummary: " +
      ( bAutoReportPrintAssemblySummary_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.showAllTracesDoNotShowTraceIfTheseTagsPresent: " +
      soShowAllTracesDoNotShowTraceIfTheseTagsPresent_  + "\n";

   soAllResources = soAllResources + "consed.nameOfFakeJoiningReadsIncludesAceFileName: " +
      ( bNameOfFakeJoiningReadsIncludesAceFileName_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.whenUserScrollsOffWindowMillisecondsBetweenScrolling: " +
      RWCString( (long) nWhenUserScrollsOffWindowMillisecondsBetweenScrolling_ )  + "\n";

   soAllResources = soAllResources + "consed.whenUserScrollsOffWindowBasesToScrollEachTime: " +
      RWCString( (long) nWhenUserScrollsOffWindowBasesToScrollEachTime_ )  + "\n";

   soAllResources = soAllResources + "consed.compareContigsUseBandedRatherThanFullSmithWaterman: " +
      ( bCompareContigsUseBandedRatherThanFullSmithWaterman_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.compareContigsBandSize: " +
      RWCString( (long) nCompareContigsBandSize_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowFwdRevPairDepthsInRedIfOnlyThisMany: " +
      RWCString( (long) nAssemblyViewShowFwdRevPairDepthsInRedIfOnlyThisMany_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewShowSequenceMatches: " +
      ( bAssemblyViewShowSequenceMatches_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOKToShowSequenceMatchesBetweenContigs: " +
      ( bAssemblyViewOKToShowSequenceMatchesBetweenContigs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOKToShowSequenceMatchesWithinContigs: " +
      ( bAssemblyViewOKToShowSequenceMatchesWithinContigs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOKToShowDirectSequenceMatches: " +
      ( bAssemblyViewOKToShowDirectSequenceMatches_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOKToShowInvertedSequenceMatches: " +
      ( bAssemblyViewOKToShowInvertedSequenceMatches_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOnlyShowSequenceMatchesToAParticularRegion: " +
      ( bAssemblyViewOnlyShowSequenceMatchesToAParticularRegion_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOnlyShowSequenceMatchesToThisContig: " +
      soAssemblyViewOnlyShowSequenceMatchesToThisContig_  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOnlyShowSequenceMatchesToThisRegionLeft: " +
      RWCString( (long) nAssemblyViewOnlyShowSequenceMatchesToThisRegionLeft_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOnlyShowSequenceMatchesToThisRegionRight: " +
      RWCString( (long) nAssemblyViewOnlyShowSequenceMatchesToThisRegionRight_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOnlyShowSequenceMatchesToEndsOfContigs: " +
      ( bAssemblyViewOnlyShowSequenceMatchesToEndsOfContigs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewOnlyShowSequenceMatchesToEndsOfContigsThisFar: " +
      RWCString( (long) nAssemblyViewOnlyShowSequenceMatchesToEndsOfContigsThisFar_ )  + "\n";

   soAllResources = soAllResources + "consed.defaultReadPrefix: " +
      soDefaultReadPrefix_  + "\n";

   soAllResources = soAllResources + "consed.readPrefixesFile: " +
      filReadPrefixesFile_  + "\n";

   soAllResources = soAllResources + "consed.maxCharsDisplayedForReadPrefix: " +
      RWCString( (long) nMaxCharsDisplayedForReadPrefix_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotDoPCRIfThisManyAvailableGapSpanningTemplates: " +
      RWCString( (long) nAutoFinishDoNotDoPCRIfThisManyAvailableGapSpanningTemplates_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotDoUnorientedPCRIfThisManyOrMoreUnorientedPCRReactions: " +
      RWCString( (long) nAutoFinishDoNotDoUnorientedPCRIfThisManyOrMoreUnorientedPCRReactions_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotDoOrientedPCRIfGapSizeLargerThanThis: " +
      RWCString( (long) nAutoFinishDoNotDoOrientedPCRIfGapSizeLargerThanThis_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotDoPCRIfEndIsExtendedByReads: " +
      ( bAutoFinishDoNotDoPCRIfEndIsExtendedByReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMaxAcceptableErrorsPerMegabase: " +
      RWCString( (long) nAutoFinishMaxAcceptableErrorsPerMegabase_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishIfNotEnoughFwdRevPairsUseThisPerCentOfInsertSize: " +
      RWCString( (long) nAutoFinishIfNotEnoughFwdRevPairsUseThisPerCentOfInsertSize_ )  + "\n";

   soAllResources = soAllResources + "consed.primersNumberOfBasesToBackUpToStartLooking: " +
      RWCString( (long) nPrimersNumberOfBasesToBackUpToStartLooking_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMakePCRPrimersThisManyBasesBackFromEndOfHighQualitySegment: " +
      RWCString( (long) nPrimersMakePCRPrimersThisManyBasesBackFromEndOfHighQualitySegment_ )  + "\n";

   soAllResources = soAllResources + "consed.primersOKToChoosePrimersInSingleSubcloneRegion: " +
      ( bPrimersOKToChoosePrimersInSingleSubcloneRegion_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersOKToChoosePrimersWhereHighQualityDiscrepancies: " +
      ( bPrimersOKToChoosePrimersWhereHighQualityDiscrepancies_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersOKToChoosePrimersWhereUnalignedHighQualityRegion: " +
      ( bPrimersOKToChoosePrimersWhereUnalignedHighQualityRegion_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCallReversesToFlankGaps: " +
      ( bAutoFinishCallReversesToFlankGaps_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowWholeCloneReads: " +
      ( bAutoFinishAllowWholeCloneReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowCustomPrimerSubcloneReads: " +
      ( bAutoFinishAllowCustomPrimerSubcloneReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowResequencingReads: " +
      ( bAutoFinishAllowResequencingReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowResequencingReadsOnlyForRunsAndStops: " +
      ( bAutoFinishAllowResequencingReadsOnlyForRunsAndStops_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowDeNovoUniversalPrimerSubcloneReads: " +
      ( bAutoFinishAllowDeNovoUniversalPrimerSubcloneReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowMinilibraries: " +
      ( bAutoFinishAllowMinilibraries_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowPCR: " +
      ( bAutoFinishAllowPCR_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowUnorientedPCRReactions: " +
      ( bAutoFinishAllowUnorientedPCRReactions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowResequencingAUniversalPrimerAutofinishRead: " +
      ( bAutoFinishAllowResequencingAUniversalPrimerAutofinishRead_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAlwaysCloseGapsUsingMinilibraries: " +
      ( bAutoFinishAlwaysCloseGapsUsingMinilibraries_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMaximumFinishingReadLength: " +
      RWCString( (long) nAutoFinishMaximumFinishingReadLength_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishSuggestMinilibraryIfGapThisManyBasesOrLarger: " +
      RWCString( (long) nAutoFinishSuggestMinilibraryIfGapThisManyBasesOrLarger_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishSuggestSpecialChemistryForRunsAndStops: " +
      ( bAutoFinishSuggestSpecialChemistryForRunsAndStops_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishSuggestThisManyMinilibrariesPerGap: " +
      RWCString( (long) nAutoFinishSuggestThisManyMinilibrariesPerGap_ )  + "\n";

   soAllResources = soAllResources + "consed.primersWindowSizeInLooking: " +
      RWCString( (long) nPrimersWindowSizeInLooking_ )  + "\n";

   soAllResources = soAllResources + "consed.primersAssumeTemplatesAreDoubleStrandedUnlessSpecified: " +
      ( bPrimersAssumeTemplatesAreDoubleStrandedUnlessSpecified_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.alignedReadsWindowInitialCharsWide: " +
      RWCString( (long) nAlignedReadsWindowInitialCharsWide_ )  + "\n";

   soAllResources = soAllResources + "consed.alignedReadsWindowInitialCharsHigh: " +
      RWCString( (long) nAlignedReadsWindowInitialCharsHigh_ )  + "\n";

   soAllResources = soAllResources + "consed.alignedReadsWindowMaxCharsForReadNames: " +
      RWCString( (long) nAlignedReadsWindowMaxCharsForReadNames_ )  + "\n";

   soAllResources = soAllResources + "consed.alignedReadsWindowAutomaticallyExpandRoomForReadNames: " +
      ( bAlignedReadsWindowAutomaticallyExpandRoomForReadNames_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishAllowResequencingReadsToExtendContigs: " +
      ( bAutoFinishAllowResequencingReadsToExtendContigs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCallHowManyReversesToFlankGaps: " +
      RWCString( (long) nAutoFinishCallHowManyReversesToFlankGaps_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCloseGaps: " +
      ( bAutoFinishCloseGaps_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishContinueEvenThoughReadInfoDoesNotMakeSense: " +
      ( bAutoFinishContinueEvenThoughReadInfoDoesNotMakeSense_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCostOfResequencingUniversalPrimerSubcloneReaction: " +
      RWCString( (double) dAutoFinishCostOfResequencingUniversalPrimerSubcloneReaction_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCostOfCustomPrimerSubcloneReaction: " +
      RWCString( (double) dAutoFinishCostOfCustomPrimerSubcloneReaction_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCostOfCustomPrimerCloneReaction: " +
      RWCString( (double) dAutoFinishCostOfCustomPrimerCloneReaction_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCostOfDeNovoUniversalPrimerSubcloneReaction: " +
      RWCString( (double) dAutoFinishCostOfDeNovoUniversalPrimerSubcloneReaction_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCostOfMinilibrary: " +
      RWCString( (double) dAutoFinishCostOfMinilibrary_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCoverSingleSubcloneRegions: " +
      ( bAutoFinishCoverSingleSubcloneRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCoverLowConsensusQualityRegions: " +
      ( bAutoFinishCoverLowConsensusQualityRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDebugUniversalPrimerReadsFile: " +
      filAutoFinishDebugUniversalPrimerReadsFile_  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDebugCustomPrimerReadsFile: " +
      filAutoFinishDebugCustomPrimerReadsFile_  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotAllowSubcloneCustomPrimerReadsCloserThanThisManyBases: " +
      RWCString( (long) nAutoFinishDoNotAllowSubcloneCustomPrimerReadsCloserThanThisManyBases_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotAllowWholeCloneCustomPrimerReadsCloserThanThisManyBases: " +
      RWCString( (long) nAutoFinishDoNotAllowWholeCloneCustomPrimerReadsCloserThanThisManyBases_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotFinishWhereTheseTagsAre: " +
      soAutoFinishDoNotFinishWhereTheseTagsAre_  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotExtendContigsWhereTheseTagsAre: " +
      soAutoFinishDoNotExtendContigsWhereTheseTagsAre_  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotExtendContigsIfTagsAreThisCloseToContigEnd: " +
      RWCString( (long) nAutoFinishDoNotExtendContigsIfTagsAreThisCloseToContigEnd_ )  + "\n";

   soAllResources = soAllResources + "consed.dumpContigOrderAndOrientationInfoToThisFile: " +
      filDumpContigOrderAndOrientationInfoToThisFile_  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDumpTemplates: " +
      ( bAutoFinishDumpTemplates_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishExcludeContigIfOnlyThisManyReadsOrLess: " +
      RWCString( (long) nAutoFinishExcludeContigIfOnlyThisManyReadsOrLess_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishExcludeContigIfDepthOfCoverageGreaterThanThis: " +
      RWCString( (double) dAutoFinishExcludeContigIfDepthOfCoverageGreaterThanThis_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishExcludeContigIfThisManyBasesOrLess: " +
      RWCString( (long) nAutoFinishExcludeContigIfThisManyBasesOrLess_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishHowManyTemplatesYouIntendToUseForCustomPrimerSubcloneReactions: " +
      RWCString( (long) nAutoFinishHowManyTemplatesYouIntendToUseForCustomPrimerSubcloneReactions_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMinNumberOfTemplatesForPrimers: " +
      RWCString( (long) nPrimersMinNumberOfTemplatesForPrimers_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMinBaseOverlapBetweenAReadAndHighQualitySegmentOfConsensus: " +
      RWCString( (long) nAutoFinishMinBaseOverlapBetweenAReadAndHighQualitySegmentOfConsensus_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishNumberOfVectorBasesAtBeginningOfAUniveralPrimerRead: " +
      RWCString( (long) nAutoFinishNumberOfVectorBasesAtBeginningOfAUniveralPrimerRead_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCDNANotGenomic: " +
      ( bAutoFinishCDNANotGenomic_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishConfidenceThatReadWillCoverSingleSubcloneRegion: " +
      RWCString( (long) nAutoFinishConfidenceThatReadWillCoverSingleSubcloneRegion_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishPrintForwardOrReverseStrandWhenPrintingSubcloneTemplatesForCustomPrimerReads: " +
      ( bAutoFinishPrintForwardOrReverseStrandWhenPrintingSubcloneTemplatesForCustomPrimerReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishPrintMinilibrariesSummaryFile: " +
      ( bAutoFinishPrintMinilibrariesSummaryFile_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishNearGapsSuggestEachMissingReadOfReadPairs: " +
      ( bAutoFinishNearGapsSuggestEachMissingReadOfReadPairs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotIgnoreLCQIfThisManyBasesFromEndOfContigForLCQTagger: " +
      RWCString( (long) nAutoFinishDoNotIgnoreLCQIfThisManyBasesFromEndOfContigForLCQTagger_ )  + "\n";

   soAllResources = soAllResources + "consed.checkIfTooManyWalks: " +
      ( bCheckIfTooManyWalks_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.numberOfColumnsBeforeReadNameInAlignedReadsWindow: " +
      RWCString( (long) nNumberOfColumnsBeforeReadNameInAlignedReadsWindow_ )  + "\n";

   soAllResources = soAllResources + "consed.compareContigsAlignsThisManyBasesMax: " +
      RWCString( (long) nCompareContigsAlignsThisManyBasesMax_ )  + "\n";

   soAllResources = soAllResources + "consed.compressedChromatExtension: " +
      soCompressedChromatExtension_  + "\n";

   soAllResources = soAllResources + "consed.dimLowQualityEndsOfReads: " +
      ( bDimLowQualityEndsOfReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.dimUnalignedEndsOfReads: " +
      ( bDimUnalignedEndsOfReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.fakeReadsSpecifiedByFilenameExtension: " +
      ( bFakeReadsSpecifiedByFilenameExtension_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.fullPathnameOfAddReads2ConsedScript: " +
      filFullPathnameOfAddReads2ConsedScript_  + "\n";

   soAllResources = soAllResources + "consed.fullPathnameOfFixContigEndScript: " +
      filFullPathnameOfFixContigEndScript_  + "\n";

   soAllResources = soAllResources + "consed.fixContigEndsCleanUpTemporaryFiles: " +
      ( bFixContigEndsCleanUpTemporaryFiles_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.fixContigEndsMinSmithWatermanScoreToMakeJoin: " +
      RWCString( (long) nFixContigEndsMinSmithWatermanScoreToMakeJoin_ )  + "\n";

   soAllResources = soAllResources + "consed.fixContigEndsMinNumberOfReadsInContig: " +
      RWCString( (long) nFixContigEndsMinNumberOfReadsInContig_ )  + "\n";

   soAllResources = soAllResources + "consed.fullPathnameOfCrossMatch: " +
      filFullPathnameOfCrossMatch_  + "\n";

   soAllResources = soAllResources + "consed.fullPathnameOfPhred: " +
      filFullPathnameOfPhred_  + "\n";

   soAllResources = soAllResources + "consed.fullPathnameOfMiniassemblyScript: " +
      filFullPathnameOfMiniassemblyScript_  + "\n";

   soAllResources = soAllResources + "consed.gunzipFullPath: " +
      soGunzipFullPath_  + "\n";

   soAllResources = soAllResources + "consed.fullPathnameOfFilter454ReadsScript: " +
      filFullPathnameOfFilter454ReadsScript_  + "\n";

   soAllResources = soAllResources + "consed.filter454ReadsAgainstThis: " +
      filFilter454ReadsAgainstThis_  + "\n";

   soAllResources = soAllResources + "consed.454LinkerSequences: " +
      fil454LinkerSequences_  + "\n";

   soAllResources = soAllResources + "consed.hideSomeTagTypesAtStartup: " +
      ( bHideSomeTagTypesAtStartup_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.maximumNumberOfTracesShown: " +
      RWCString( (long) nMaximumNumberOfTracesShown_ )  + "\n";

   soAllResources = soAllResources + "consed.navigateAutomaticTracePopup: " +
      ( bNavigateAutomaticTracePopup_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.navigateAutomaticAllTracesPopup: " +
      ( bNavigateAutomaticAllTracesPopup_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersMinimumLengthOfAPrimer: " +
      RWCString( (long) nPrimersMinimumLengthOfAPrimer_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaximumLengthOfAPrimer: " +
      RWCString( (long) nPrimersMaximumLengthOfAPrimer_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMinimumLengthOfAPrimerForPCR: " +
      RWCString( (long) nPrimersMinimumLengthOfAPrimerForPCR_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaximumLengthOfAPrimerForPCR: " +
      RWCString( (long) nPrimersMaximumLengthOfAPrimerForPCR_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxMeltingTempDifferenceForPCR: " +
      RWCString( (double) dPrimersMaxMeltingTempDifferenceForPCR_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxPCRPrimerPairsToDisplay: " +
      RWCString( (long) nPrimersMaxPCRPrimerPairsToDisplay_ )  + "\n";

   soAllResources = soAllResources + "consed.primersCheckJustSomePCRPrimerPairsRatherThanAll: " +
      ( bPrimersCheckJustSomePCRPrimerPairsRatherThanAll_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersNumberOfTemplatesToDisplayInFront: " +
      RWCString( (long) nPrimersNumberOfTemplatesToDisplayInFront_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxLengthOfMononucleotideRepeat: " +
      RWCString( (long) nPrimersMaxLengthOfMononucleotideRepeat_ )  + "\n";

   soAllResources = soAllResources + "consed.primersBadLibrariesFile: " +
      filPrimersBadLibrariesFile_  + "\n";

   soAllResources = soAllResources + "consed.primersLibrariesInfoFile: " +
      filPrimersLibrariesInfoFile_  + "\n";

   soAllResources = soAllResources + "consed.primersBadTemplatesFile: " +
      filPrimersBadTemplatesFile_  + "\n";

   soAllResources = soAllResources + "consed.primersChooseTemplatesByPositionInsteadOfQuality: " +
      ( bPrimersChooseTemplatesByPositionInsteadOfQuality_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersWhenChoosingATemplateMinPotentialReadLength: " +
      RWCString( (long) nPrimersWhenChoosingATemplateMinPotentialReadLength_ )  + "\n";

   soAllResources = soAllResources + "consed.primersWindowSizeInLookingForPCR: " +
      RWCString( (long) nPrimersWindowSizeInLookingForPCR_ )  + "\n";

   soAllResources = soAllResources + "consed.qualityThresholdForFindingHighQualityDiscrepancies: " +
      RWCString( (long) nQualityThresholdForFindingHighQualityDiscrepancies_ )  + "\n";

   soAllResources = soAllResources + "consed.qualityThresholdForNavigateByDepthOfCoverage: " +
      RWCString( (long) nQualityThresholdForNavigateByDepthOfCoverage_ )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighDepthOfCoverageNotLow: " +
      ( bNavigateByHighDepthOfCoverageNotLow_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.MinDepthForNavigateByDepthOfCoverage: " +
      RWCString( (long) nMinDepthForNavigateByDepthOfCoverage_ )  + "\n";

   soAllResources = soAllResources + "consed.defaultVectorPathnameForRestrictionFragments: " +
      filDefaultVectorPathnameForRestrictionFragments_  + "\n";

   soAllResources = soAllResources + "consed.fileOfAdditionalRestrictionEnzymes: " +
      filFileOfAdditionalRestrictionEnzymes_  + "\n";

   soAllResources = soAllResources + "consed.commonRestrictionEnzymes: " +
      soCommonRestrictionEnzymes_  + "\n";

   soAllResources = soAllResources + "consed.defaultSelectedRestrictionEnzymes: " +
      soDefaultSelectedRestrictionEnzymes_  + "\n";

   soAllResources = soAllResources + "consed.restrictionEnzymesActualFragmentsFile: " +
      filRestrictionEnzymesActualFragmentsFile_  + "\n";

   soAllResources = soAllResources + "consed.restrictionDigestInitialWindowSizeInTextRows: " +
      RWCString( (long) nRestrictionDigestInitialWindowSizeInTextRows_ )  + "\n";

   soAllResources = soAllResources + "consed.restrictionDigestDoNoShowAreaOfFragmentsOverThisSize: " +
      RWCString( (long) nRestrictionDigestDoNoShowAreaOfFragmentsOverThisSize_ )  + "\n";

   soAllResources = soAllResources + "consed.showReadsAlphabetically: " +
      ( bShowReadsAlphabetically_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.showReadsInAlignedReadsWindowOrderedByFile: " +
      ( bShowReadsInAlignedReadsWindowOrderedByFile_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.showReadsInAlignedReadsWindowOrderedByThisFile: " +
      filShowReadsInAlignedReadsWindowOrderedByThisFile_  + "\n";

   soAllResources = soAllResources + "consed.showReadsAtCursorSortedHow: " +
      soShowReadsAtCursorSortedHow_  + "\n";

   soAllResources = soAllResources + "consed.showABIBasesInTraceWindow: " +
      ( bShowABIBasesInTraceWindow_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.tracesWindowInitialPixelHeight: " +
      RWCString( (long) nTracesWindowInitialPixelHeight_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewWindowInitialPixelHeight: " +
      RWCString( (long) nAssemblyViewWindowInitialPixelHeight_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewFileOfTemplatesToNotShow: " +
      filAssemblyViewFileOfTemplatesToNotShow_  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewCrossMatchMinmatch: " +
      RWCString( (long) nAssemblyViewCrossMatchMinmatch_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewCrossMatchMinscore: " +
      RWCString( (long) nAssemblyViewCrossMatchMinscore_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewFindSequenceMatchesForConsedScript: " +
      filAssemblyViewFindSequenceMatchesForConsedScript_  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewCrossmatchMinmatch: " +
      RWCString( (long) nAssemblyViewCrossmatchMinmatch_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewCrossmatchMinscore: " +
      RWCString( (long) nAssemblyViewCrossmatchMinscore_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewSequenceMatchesMinimumSimilarity: " +
      RWCString( (long) nAssemblyViewSequenceMatchesMinimumSimilarity_ )  + "\n";

   soAllResources = soAllResources + "consed.tracesWindowInitialPixelWidth: " +
      RWCString( (long) nTracesWindowInitialPixelWidth_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewWindowInitialPixelWidth: " +
      RWCString( (long) nAssemblyViewWindowInitialPixelWidth_ )  + "\n";

   soAllResources = soAllResources + "consed.automaticallyScaleTraces: " +
      ( bAutomaticallyScaleTraces_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.automaticallyScaleTracesSamplePeakHeightFractionOfWindowHeight: " +
      RWCString( (double) dAutomaticallyScaleTracesSamplePeakHeightFractionOfWindowHeight_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.automaticallyScaleTracesSamplePeakPercentile: " +
      RWCString( (long) nAutomaticallyScaleTracesSamplePeakPercentile_ )  + "\n";

   soAllResources = soAllResources + "consed.verticalTraceMagnification: " +
      RWCString( (long) nVerticalTraceMagnification_ )  + "\n";

   soAllResources = soAllResources + "consed.userDefinedKeys: " +
      soUserDefinedKeys_  + "\n";

   soAllResources = soAllResources + "consed.programsForUserDefinedKeys: " +
      soProgramsForUserDefinedKeys_  + "\n";

   soAllResources = soAllResources + "consed.argumentsToPassToUserDefinedPrograms: " +
      soArgumentsToPassToUserDefinedPrograms_  + "\n";

   soAllResources = soAllResources + "consed.tagsToApplyWithUserDefinedKeys: " +
      soTagsToApplyWithUserDefinedKeys_  + "\n";

   soAllResources = soAllResources + "consed.snpGenomeUseInsertionPolymorphisms: " +
      ( bSnpGenomeUseInsertionPolymorphisms_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.listOfTagTypesToHide: " +
      soListOfTagTypesToHide_  + "\n";

   soAllResources = soAllResources + "consed.listOfOptionalWordsToSaveInListOfReadNames: " +
      soListOfOptionalWordsToSaveInListOfReadNames_  + "\n";

   soAllResources = soAllResources + "consed.extendConsensusWithHighQuality: " +
      ( bExtendConsensusWithHighQuality_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.fastStartup: " +
      ( bFastStartup_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.fastStartupFile: " +
      filFastStartupFile_  + "\n";

   soAllResources = soAllResources + "consed.alwaysRunProgramToGetChromats: " +
      soAlwaysRunProgramToGetChromats_  + "\n";

   soAllResources = soAllResources + "consed.programToRunToGetChromats: " +
      filProgramToRunToGetChromats_  + "\n";

   soAllResources = soAllResources + "consed.programToRunToGetChromatsOf454Reads: " +
      filProgramToRunToGetChromatsOf454Reads_  + "\n";

   soAllResources = soAllResources + "consed.createFakeChromatsForSolexaReads: " +
      ( bCreateFakeChromatsForSolexaReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishUseLongModelReadRatherThanShort: " +
      ( bAutoFinishUseLongModelReadRatherThanShort_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.askAgainIfWantToQuitConsedIfThisManyReads: " +
      RWCString( (long) nAskAgainIfWantToQuitConsedIfThisManyReads_ )  + "\n";

   soAllResources = soAllResources + "consed.printWindowInstructions: " +
      soPrintWindowInstructions_  + "\n";

   soAllResources = soAllResources + "consed.allowMultipleSearchForStringWindows: " +
      ( bAllowMultipleSearchForStringWindows_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoPCRAmplifyFalseProductsOKIfLargerThanThis: " +
      RWCString( (long) nAutoPCRAmplifyFalseProductsOKIfLargerThanThis_ )  + "\n";

   soAllResources = soAllResources + "consed.autoPCRAmplifyMakePrimerOutOfFirstRegion: " +
      ( bAutoPCRAmplifyMakePrimerOutOfFirstRegion_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoPCRAmplifyMaybeRejectPrimerIfThisCloseToDesiredProduct: " +
      RWCString( (long) nAutoPCRAmplifyMaybeRejectPrimerIfThisCloseToDesiredProduct_ )  + "\n";

   soAllResources = soAllResources + "consed.addNewReadsRecalculateConsensusQuality: " +
      ( bAddNewReadsRecalculateConsensusQuality_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.addNewReadsPutReadIntoItsOwnContig: " +
      soAddNewReadsPutReadIntoItsOwnContig_  + "\n";

   soAllResources = soAllResources + "consed.addNewReadsCheckThatCrossMatchRunCorrectly: " +
      ( bAddNewReadsCheckThatCrossMatchRunCorrectly_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewNumberOfRowsOfTags: " +
      RWCString( (long) nAssemblyViewNumberOfRowsOfTags_ )  + "\n";

   soAllResources = soAllResources + "consed.warnUserWhenTryingToEditAllReads: " +
      ( bWarnUserWhenTryingToEditAllReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.maybeXKEYSYMDBPath: " +
      filMaybeXKEYSYMDBPath_  + "\n";

   soAllResources = soAllResources + "consed.maybeXKEYSYMDBPath2: " +
      filMaybeXKEYSYMDBPath2_  + "\n";

   soAllResources = soAllResources + "consed.amountToMoveWithBigLeftAndRightArrows: " +
      RWCString( (long) nAmountToMoveWithBigLeftAndRightArrows_ )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighlyDiscrepantPositionsMinDiscrepantReads: " +
      RWCString( (long) nNavigateByHighlyDiscrepantPositionsMinDiscrepantReads_ )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighlyDiscrepantPositionsMaxDepthOfCoverage: " +
      RWCString( (long) nNavigateByHighlyDiscrepantPositionsMaxDepthOfCoverage_ )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighlyDiscrepantPositionsIgnoreBasesBelowThisQuality: " +
      RWCString( (long) nNavigateByHighlyDiscrepantPositionsIgnoreBasesBelowThisQuality_ )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighlyDiscrepantPositionsJustListIndels: " +
      ( bNavigateByHighlyDiscrepantPositionsJustListIndels_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighlyDiscrepantPositionsIgnoreOtherReadsStartingAtSameLocation: " +
      ( bNavigateByHighlyDiscrepantPositionsIgnoreOtherReadsStartingAtSameLocation_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighlyDiscrepantPositionsIgnoreIfListedBasesInConsensus: " +
      ( bNavigateByHighlyDiscrepantPositionsIgnoreIfListedBasesInConsensus_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighlyDiscrepantPositionsIgnoreIfTheseBasesInConsensus: " +
      soNavigateByHighlyDiscrepantPositionsIgnoreIfTheseBasesInConsensus_  + "\n";

   soAllResources = soAllResources + "consed.phdBallDirectory: " +
      filPhdBallDirectory_  + "\n";

   soAllResources = soAllResources + "consed.newAceFileFOF: " +
      filNewAceFileFOF_  + "\n";

   soAllResources = soAllResources + "consed.navigateByHighOrLowDepthCoalesceRegionsIfThisClose: " +
      RWCString( (long) nNavigateByHighOrLowDepthCoalesceRegionsIfThisClose_ )  + "\n";

   soAllResources = soAllResources + "consed.removeReadsDeleteNotJustPutInOwnContig: " +
      ( bRemoveReadsDeleteNotJustPutInOwnContig_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.paired454LeftReadExtension: " +
      soPaired454LeftReadExtension_  + "\n";

   soAllResources = soAllResources + "consed.paired454RightReadExtension: " +
      soPaired454RightReadExtension_  + "\n";

   soAllResources = soAllResources + "consed.snpGenome1MSnps: " +
      filSnpGenome1MSnps_  + "\n";

   soAllResources = soAllResources + "consed.diffChromosomesExcludeDeletions: " +
      ( bDiffChromosomesExcludeDeletions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.snpGenomeFilterByWeight: " +
      ( bSnpGenomeFilterByWeight_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.wantReadsUpToThisFarFromSnps: " +
      RWCString( (long) nWantReadsUpToThisFarFromSnps_ )  + "\n";

   soAllResources = soAllResources + "consed.phaster2PhdBallSaveWhichMate: " +
      soPhaster2PhdBallSaveWhichMate_  + "\n";

   soAllResources = soAllResources + "consed.phaster2PhdBallSaveInPhasterFormat: " +
      ( bPhaster2PhdBallSaveInPhasterFormat_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.phaster2PhdBallCalculateNewLocationsFile: " +
      ( bPhaster2PhdBallCalculateNewLocationsFile_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.phdBall2FastaIgnoreLowQualityReads: " +
      ( bPhdBall2FastaIgnoreLowQualityReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.phdBall2FastaLowestAverageQuality: " +
      RWCString( (long) nPhdBall2FastaLowestAverageQuality_ )  + "\n";

   soAllResources = soAllResources + "consed.nextPhredPipelineControlFile: " +
      filNextPhredPipelineControlFile_  + "\n";

   soAllResources = soAllResources + "consed.nextPhredPipelineTiffPerlScript: " +
      filNextPhredPipelineTiffPerlScript_  + "\n";

   soAllResources = soAllResources + "consed.nextPhredPipelinePhasterPerlScript: " +
      filNextPhredPipelinePhasterPerlScript_  + "\n";

   soAllResources = soAllResources + "consed.nextPhredPipelineVersion: " +
      soNextPhredPipelineVersion_  + "\n";

   soAllResources = soAllResources + "consed.nextPhredPipelineMainDirectory: " +
      soNextPhredPipelineMainDirectory_  + "\n";

   soAllResources = soAllResources + "consed.maxNumberOfReadsPerPhdBall: " +
      RWCString( (long) nMaxNumberOfReadsPerPhdBall_ )  + "\n";

   soAllResources = soAllResources + "consed.userWantsToSaveToThisAceFile: " +
      filUserWantsToSaveToThisAceFile_  + "\n";

   soAllResources = soAllResources + "consed.autoFinishEmulate9_66Behavior: " +
      ( bAutoFinishEmulate9_66Behavior_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersPCRPrimersGroupedIntoWindowOfThisManyBases: " +
      RWCString( (long) nPrimersPCRPrimersGroupedIntoWindowOfThisManyBases_ )  + "\n";

   soAllResources = soAllResources + "consed.primersLookForThisManyPCRPrimerPairsPerPairOfGroups: " +
      RWCString( (long) nPrimersLookForThisManyPCRPrimerPairsPerPairOfGroups_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishStandardDeviationsFromMeanFromGapToLookForTemplatesForSuggestingEachMissingReadOfReadPairs: " +
      RWCString( (double) dAutoFinishStandardDeviationsFromMeanFromGapToLookForTemplatesForSuggestingEachMissingReadOfReadPairs_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishCheckThatReadsFromTheSameTemplateAreConsistent: " +
      ( bAutoFinishCheckThatReadsFromTheSameTemplateAreConsistent_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotAllowSubcloneCustomPrimerReadsCloseTogether: " +
      ( bAutoFinishDoNotAllowSubcloneCustomPrimerReadsCloseTogether_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotAllowWholeCloneCustomPrimerReadsCloseTogether: " +
      ( bAutoFinishDoNotAllowWholeCloneCustomPrimerReadsCloseTogether_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMinilibrariesPreferTemplateIfSizeThisManyStdDevsFromMean: " +
      RWCString( (double) dAutoFinishMinilibrariesPreferTemplateIfSizeThisManyStdDevsFromMean_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMinNumberOfForwardReversePairsInLibraryToCalculateAverageInsertSize: " +
      RWCString( (long) nAutoFinishMinNumberOfForwardReversePairsInLibraryToCalculateAverageInsertSize_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishIfEnoughFwdRevPairsUseThisManyStdDevBelowMeanForInsertSize: " +
      RWCString( (double) dAutoFinishIfEnoughFwdRevPairsUseThisManyStdDevBelowMeanForInsertSize_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishNewCustomPrimerReadThisFarFromOldCustomPrimerRead: " +
      RWCString( (long) nAutoFinishNewCustomPrimerReadThisFarFromOldCustomPrimerRead_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMinNumberOfSingleSubcloneBasesFixedByAnExp: " +
      RWCString( (long) nAutoFinishMinNumberOfSingleSubcloneBasesFixedByAnExp_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishNumberOfBasesBetweenContigsAssumed: " +
      RWCString( (long) nAutoFinishNumberOfBasesBetweenContigsAssumed_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishPotentialHighQualityPartOfReadStart: " +
      RWCString( (long) nAutoFinishPotentialHighQualityPartOfReadStart_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishPotentialHighQualityPartOfReadEnd: " +
      RWCString( (long) nAutoFinishPotentialHighQualityPartOfReadEnd_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishPrintCustomNavigationFileForChosenReads: " +
      ( bAutoFinishPrintCustomNavigationFileForChosenReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishReversesForFlankingGapsTemplateMustProtrudeFromContigThisMuch: " +
      RWCString( (long) nAutoFinishReversesForFlankingGapsTemplateMustProtrudeFromContigThisMuch_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishTagOligosWhenDoExperiments: " +
      ( bAutoFinishTagOligosWhenDoExperiments_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.countPads: " +
      ( bCountPads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.debugging: " +
      RWCString( (long) nDebugging_ )  + "\n";

   soAllResources = soAllResources + "consed.debugging2: " +
      RWCString( (long) nDebugging2_ )  + "\n";

   soAllResources = soAllResources + "consed.debugging3: " +
      RWCString( (long) nDebugging3_ )  + "\n";

   soAllResources = soAllResources + "consed.debuggingString: " +
      soDebuggingString_  + "\n";

   soAllResources = soAllResources + "consed.ignoreHighQualityDiscrepanciesThisManyBasesFromEndOfAlignedRegion: " +
      RWCString( (long) nIgnoreHighQualityDiscrepanciesThisManyBasesFromEndOfAlignedRegion_ )  + "\n";

   soAllResources = soAllResources + "consed.ignoreUnalignedHighQualitySegmentsShorterThanThis: " +
      RWCString( (long) nIgnoreUnalignedHighQualitySegmentsShorterThanThis_ )  + "\n";

   soAllResources = soAllResources + "consed.primersLookThisFarForForwardVectorInsertJunction: " +
      RWCString( (long) nPrimersLookThisFarForForwardVectorInsertJunction_ )  + "\n";

   soAllResources = soAllResources + "consed.primersDNAConcentrationNanomolar: " +
      RWCString( (double) dPrimersDNAConcentrationNanomolar_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxMatchElsewhereScore: " +
      RWCString( (long) nPrimersMaxMatchElsewhereScore_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxMatchElsewhereScoreForPCR: " +
      RWCString( (long) nPrimersMaxMatchElsewhereScoreForPCR_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxSelfMatchScore: " +
      RWCString( (long) nPrimersMaxSelfMatchScore_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMaxPrimerDimerScoreForPCR: " +
      RWCString( (long) nPrimersMaxPrimerDimerScoreForPCR_ )  + "\n";

   soAllResources = soAllResources + "consed.primersMinQuality: " +
      RWCString( (long) nPrimersMinQuality_ )  + "\n";

   soAllResources = soAllResources + "consed.primersPrintInfoOnRejectedTemplates: " +
      ( bPrimersPrintInfoOnRejectedTemplates_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersSaltConcentrationMillimolar: " +
      RWCString( (double) dPrimersSaltConcentrationMillimolar_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.primersScreenForVector: " +
      ( bPrimersScreenForVector_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.primersToleranceForDifferentBeginningLocationOfUniversalPrimerReads: " +
      RWCString( (long) nPrimersToleranceForDifferentBeginningLocationOfUniversalPrimerReads_ )  + "\n";

   soAllResources = soAllResources + "consed.primersTooManyVectorBasesInWalkingRead: " +
      RWCString( (long) nPrimersTooManyVectorBasesInWalkingRead_ )  + "\n";

   soAllResources = soAllResources + "consed.qualityThresholdForLowConsensusQuality: " +
      RWCString( (long) nQualityThresholdForLowConsensusQuality_ )  + "\n";

   soAllResources = soAllResources + "consed.tagColorPerCentOfBase: " +
      RWCString( (long) nTagColorPerCentOfBase_ )  + "\n";

   soAllResources = soAllResources + "consed.uncompressedChromatDirectory: " +
      soUncompressedChromatDirectory_  + "\n";

   soAllResources = soAllResources + "consed.454sff2scfDirectory: " +
      fil454sff2scfDirectory_  + "\n";

   soAllResources = soAllResources + "consed.whenMakingFakeReadToJoinContigsAddThisManyBasesOnEitherSideOfAlignedRegion: " +
      RWCString( (long) nWhenMakingFakeReadToJoinContigsAddThisManyBasesOnEitherSideOfAlignedRegion_ )  + "\n";

   soAllResources = soAllResources + "consed.writeThisAceFormat: " +
      RWCString( (long) nWriteThisAceFormat_ )  + "\n";

   soAllResources = soAllResources + "consed.dumpCoreIfBoundsError: " +
      ( bDumpCoreIfBoundsError_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishMinSmithWatermanScoreOfARun: " +
      RWCString( (long) nAutoFinishMinSmithWatermanScoreOfARun_ )  + "\n";

   soAllResources = soAllResources + "consed.autoFinishDoNotComparePCRPrimersMoreThanThisManyTimes: " +
      RWCString( (double) dAutoFinishDoNotComparePCRPrimersMoreThanThisManyTimes_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.restrictionDigestMaximumBasesToCompareToVector: " +
      RWCString( (long) nRestrictionDigestMaximumBasesToCompareToVector_ )  + "\n";

   soAllResources = soAllResources + "consed.restrictionDigestZoomFactor: " +
      RWCString( (double) dRestrictionDigestZoomFactor_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.restrictionDigestZoomFactorForNavigate: " +
      RWCString( (double) dRestrictionDigestZoomFactorForNavigate_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.restrictionDigestToleranceInPositionUnits: " +
      RWCString( (long) nRestrictionDigestToleranceInPositionUnits_ )  + "\n";

   soAllResources = soAllResources + "consed.autoPCRAmplifyTooManySeriousFalseMatches: " +
      RWCString( (long) nAutoPCRAmplifyTooManySeriousFalseMatches_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewZoomFactor: " +
      RWCString( (double) dAssemblyViewZoomFactor_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewFilterInconsistentFwdRevPairsIfThisClose: " +
      RWCString( (long) nAssemblyViewFilterInconsistentFwdRevPairsIfThisClose_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewGridCellWidthInPixels: " +
      RWCString( (double) dAssemblyViewGridCellWidthInPixels_, 3 )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewCursorSensitivityInPixels: " +
      RWCString( (long) nAssemblyViewCursorSensitivityInPixels_ )  + "\n";

   soAllResources = soAllResources + "consed.assemblyViewReadDepthQuality: " +
      RWCString( (long) nAssemblyViewReadDepthQuality_ )  + "\n";

   soAllResources = soAllResources + "consed.showAllTracesMaxNumberOfTracesToShowAtOnce: " +
      RWCString( (long) nShowAllTracesMaxNumberOfTracesToShowAtOnce_ )  + "\n";

   soAllResources = soAllResources + "consed.allowFwdRevPairScaffoldsToBeMergedIfThisManyBasesIntersectionOrLess: " +
      RWCString( (long) nAllowFwdRevPairScaffoldsToBeMergedIfThisManyBasesIntersectionOrLess_ )  + "\n";

   soAllResources = soAllResources + "consed.justForPrimateProject: " +
      ( bJustForPrimateProject_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.solexaFilesAreAssumedToBeHere: " +
      filSolexaFilesAreAssumedToBeHere_  + "\n";

   soAllResources = soAllResources + "consed.solexaAlignmentFilesPerInsertingPadsCycle: " +
      RWCString( (long) nSolexaAlignmentFilesPerInsertingPadsCycle_ )  + "\n";

   soAllResources = soAllResources + "consed.solexaAlignmentsPerAlignmentFile: " +
      RWCString( (long) nSolexaAlignmentsPerAlignmentFile_ )  + "\n";

   soAllResources = soAllResources + "consed.solexaFastqFilesArePhredQualityNotSolexaQuality: " +
      ( bSolexaFastqFilesArePhredQualityNotSolexaQuality_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.solexa64FastqOrSanger33Fastq: " +
      soSolexa64FastqOrSanger33Fastq_  + "\n";

   soAllResources = soAllResources + "consed.maximumReadsInReadList: " +
      RWCString( (long) nMaximumReadsInReadList_ )  + "\n";

   soAllResources = soAllResources + "consed.maxLengthOfReadsInapLocatedFragment2: " +
      RWCString( (long) nMaxLengthOfReadsInapLocatedFragment2_ )  + "\n";

   soAllResources = soAllResources + "consed.maximumStartupErrorsToReport: " +
      RWCString( (long) nMaximumStartupErrorsToReport_ )  + "\n";

   soAllResources = soAllResources + "consed.454LinkerAlignmentMatchScore: " +
      RWCString( (long) n454LinkerAlignmentMatchScore_ )  + "\n";

   soAllResources = soAllResources + "consed.454LinkerAlignmentMismatchScore: " +
      RWCString( (long) n454LinkerAlignmentMismatchScore_ )  + "\n";

   soAllResources = soAllResources + "consed.454LinkerAlignmentIndelScore: " +
      RWCString( (long) n454LinkerAlignmentIndelScore_ )  + "\n";

   soAllResources = soAllResources + "consed.filter454ReadsDeleteCrossMatchOutput: " +
      ( bFilter454ReadsDeleteCrossMatchOutput_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportAllNeededSpeciesCode: " +
      RWCString( (long) nAutoReportAllNeededSpeciesCode_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportUseCommasInBigNumbers: " +
      ( bAutoReportUseCommasInBigNumbers_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintToCompareToReich: " +
      ( bAutoReportPrintToCompareToReich_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportOnlyAllowSitesThatAreBetweenAcceptableSites: " +
      ( bAutoReportOnlyAllowSitesThatAreBetweenAcceptableSites_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportDeaminationMutationsDeterminedByMoreAccurateMethod: " +
      ( bAutoReportDeaminationMutationsDeterminedByMoreAccurateMethod_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportChooseTreesUsingBadData: " +
      ( bAutoReportChooseTreesUsingBadData_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportChooseTreesByCountingDeaminationMutations: " +
      ( bAutoReportChooseTreesByCountingDeaminationMutations_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportChooseTreesUsingKimura: " +
      ( bAutoReportChooseTreesUsingKimura_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintCrudeChimpHumanMutations: " +
      ( bAutoReportPrintCrudeChimpHumanMutations_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintPositionsForGraham: " +
      ( bAutoReportPrintPositionsForGraham_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintAncestralCpGs: " +
      ( bAutoReportPrintAncestralCpGs_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintCpGMutations: " +
      ( bAutoReportPrintCpGMutations_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintMutationsWithContext: " +
      ( bAutoReportPrintMutationsWithContext_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCountAllMutationsML: " +
      ( bAutoReportCountAllMutationsML_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCountAllMutations: " +
      ( bAutoReportCountAllMutations_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportIgnoreMultipleTrees: " +
      ( bAutoReportIgnoreMultipleTrees_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCountAcceptableColumnsWithNoneOnLeft: " +
      ( bAutoReportCountAcceptableColumnsWithNoneOnLeft_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintFlankedColumns4: " +
      ( bAutoReportPrintFlankedColumns4_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportUseAnnotationFormat: " +
      ( bAutoReportUseAnnotationFormat_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintFlankedColumns3: " +
      ( bAutoReportPrintFlankedColumns3_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintFlankedColumns2: " +
      ( bAutoReportPrintFlankedColumns2_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintFlankedColumns: " +
      ( bAutoReportPrintFlankedColumns_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportHighQualitySegmentData: " +
      ( bAutoReportHighQualitySegmentData_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportGoodReadsBug: " +
      ( bAutoReportGoodReadsBug_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportDiscrepancyRateInFlankedRegions: " +
      ( bAutoReportDiscrepancyRateInFlankedRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportDiscrepancyRateInFlankedRegions2: " +
      ( bAutoReportDiscrepancyRateInFlankedRegions2_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportDiscrepancyRateInFlankedRegions4: " +
      ( bAutoReportDiscrepancyRateInFlankedRegions4_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportDiscrepancyRateInFlankedRegions5: " +
      ( bAutoReportDiscrepancyRateInFlankedRegions5_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportSingleSignalOrQuality: " +
      ( bAutoReportSingleSignalOrQuality_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportLowQualityBasesInHQS: " +
      ( bAutoReportLowQualityBasesInHQS_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCompareHQSWithLQS: " +
      ( bAutoReportCompareHQSWithLQS_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCountColumnsForGroupsOfSpecies: " +
      ( bAutoReportCountColumnsForGroupsOfSpecies_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportSingleSignalInfo: " +
      ( bAutoReportSingleSignalInfo_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportSingleSignalInfo2: " +
      ( bAutoReportSingleSignalInfo2_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCompareTopAndBottomStrands: " +
      ( bAutoReportCompareTopAndBottomStrands_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCompareTopAndBottomStrandsNoHuman: " +
      ( bAutoReportCompareTopAndBottomStrandsNoHuman_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCompareTopAndBottomStrands2: " +
      ( bAutoReportCompareTopAndBottomStrands2_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCompareTopAndBottomStrands3: " +
      ( bAutoReportCompareTopAndBottomStrands3_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCompareTopAndBottomStrands4: " +
      ( bAutoReportCompareTopAndBottomStrands4_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportTopStrandPinnedPosition: " +
      RWCString( (long) nAutoReportTopStrandPinnedPosition_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportBottomStrandPinnedPosition: " +
      RWCString( (long) nAutoReportBottomStrandPinnedPosition_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCompareTopAndBottomStrandsWithHuman: " +
      ( bAutoReportCompareTopAndBottomStrandsWithHuman_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintLengthsOfAlignedSegmentsOfReads: " +
      ( bAutoReportPrintLengthsOfAlignedSegmentsOfReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintLengthsOfUnalignedHighQualitySegmentsOfReads: " +
      ( bAutoReportPrintLengthsOfUnalignedHighQualitySegmentsOfReads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintIfReadsAreCorrectlyAligned: " +
      ( bAutoReportPrintIfReadsAreCorrectlyAligned_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportCalculateErrorProbabilitiesByComparingPTroPPan: " +
      ( bAutoReportCalculateErrorProbabilitiesByComparingPTroPPan_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintAgreeDisagreeBetweenPairsOfSpecies: " +
      ( bAutoReportPrintAgreeDisagreeBetweenPairsOfSpecies_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintAgreeDisagreeBetweenPairsOfSpecies2: " +
      ( bAutoReportPrintAgreeDisagreeBetweenPairsOfSpecies2_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportFilterSingleSignal: " +
      ( bAutoReportFilterSingleSignal_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportGoodHitReads: " +
      filAutoReportGoodHitReads_  + "\n";

   soAllResources = soAllResources + "consed.autoReportQualityWindowLow: " +
      RWCString( (long) nAutoReportQualityWindowLow_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportQualityWindowHigh: " +
      RWCString( (long) nAutoReportQualityWindowHigh_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintNumberOfIsolatedPadsForEachSpecies: " +
      ( bAutoReportPrintNumberOfIsolatedPadsForEachSpecies_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintNumberOfIsolatedPads: " +
      ( bAutoReportPrintNumberOfIsolatedPads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportIsolatedPadsOfReadsWithThisPattern: " +
      soAutoReportIsolatedPadsOfReadsWithThisPattern_  + "\n";

   soAllResources = soAllResources + "consed.autoReportMinNumberOfPerfectlyAlignedBasesBeforeDiscrepancy: " +
      RWCString( (long) nAutoReportMinNumberOfPerfectlyAlignedBasesBeforeDiscrepancy_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportMaxSizeOfDiscrepantRegion: " +
      RWCString( (long) nAutoReportMaxSizeOfDiscrepantRegion_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportSizeOfDiscrepantRegion: " +
      RWCString( (long) nAutoReportSizeOfDiscrepantRegion_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintMinimumQualityHistogram: " +
      ( bAutoReportPrintMinimumQualityHistogram_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintDiscrepantRegions: " +
      ( bAutoReportPrintDiscrepantRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintBasesInDiscrepantRegions: " +
      ( bAutoReportPrintBasesInDiscrepantRegions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintDiscrepantRegionsButIgnoreReadsContainingThis: " +
      soAutoReportPrintDiscrepantRegionsButIgnoreReadsContainingThis_  + "\n";

   soAllResources = soAllResources + "consed.autoReportBackboneReadHasThisStringInIt: " +
      soAutoReportBackboneReadHasThisStringInIt_  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintDiscrepantRegionsButOnlyIfAboveQualityThreshold: " +
      ( bAutoReportPrintDiscrepantRegionsButOnlyIfAboveQualityThreshold_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintSpeciesAlignment: " +
      ( bAutoReportPrintSpeciesAlignment_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintReadAlignment: " +
      ( bAutoReportPrintReadAlignment_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintTheseReads: " +
      filAutoReportPrintTheseReads_  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintReadPositions: " +
      ( bAutoReportPrintReadPositions_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrintChosenReadName: " +
      ( bAutoReportPrintChosenReadName_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportNumbersOfCharactersOfChosenReadNameToBePrinted: " +
      RWCString( (long) nAutoReportNumbersOfCharactersOfChosenReadNameToBePrinted_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportPrefix: " +
      soAutoReportPrefix_  + "\n";

   soAllResources = soAllResources + "consed.autoReportUseOldCriteriaForDeletingColumnsOfPads: " +
      ( bAutoReportUseOldCriteriaForDeletingColumnsOfPads_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportDeleteColumnsOfPadsBeforeAdjustingReadQualityValues: " +
      ( bAutoReportDeleteColumnsOfPadsBeforeAdjustingReadQualityValues_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportFlankingBasesMustBeSingleSignal: " +
      ( bAutoReportFlankingBasesMustBeSingleSignal_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportMinimumQualityOfFlankingBases: " +
      RWCString( (long) nAutoReportMinimumQualityOfFlankingBases_ )  + "\n";

   soAllResources = soAllResources + "consed.autoReportFlankingBasesMustBeInHighQualitySegment: " +
      ( bAutoReportFlankingBasesMustBeInHighQualitySegment_ ? "true" : "false" )  + "\n";

   soAllResources = soAllResources + "consed.autoReportSpecies: " +
      soAutoReportSpecies_  + "\n";




   return( soAllResources );
}