/*****************************************************************************
#   Copyright (C) 1994-2008 by David Gordon.
#   All rights reserved.                           
#                                                                           
#   This software is part of a beta-test version of the Consed/Autofinish
#   package.  It should not be redistributed or
#   used for any commercial purpose, including commercially funded
#   sequencing, without written permission from the author and the
#   University of Washington.
#   
#   This software is provided ``AS IS'' and any express or implied
#   warranties, including, but not limited to, the implied warranties of
#   merchantability and fitness for a particular purpose, are disclaimed.
#   In no event shall the authors or the University of Washington be
#   liable for any direct, indirect, incidental, special, exemplary, or
#   consequential damages (including, but not limited to, procurement of
#   substitute goods or services; loss of use, data, or profits; or
#   business interruption) however caused and on any theory of liability,
#   whether in contract, strict liability, or tort (including negligence
#   or otherwise) arising in any way out of the use of this software, even
#   if advised of the possibility of such damage.
#
#   Building Consed from source is error prone and not simple which is
#   why I provide executables.  Due to time limitations I cannot
#   provide any assistance in building Consed.  Even if you do not
#   modify the source, you may introduce errors due to using a
#   different version of the compiler, a different version of motif,
#   different versions of other libraries than I used, etc.  For this
#   reason, if you discover Consed bugs, I can only offer help with
#   those bugs if you first reproduce those bugs with an executable
#   provided by me--not an executable you have built.
# 
#   Modifying Consed is also difficult.  Although Consed is modular,
#   some modules are used by many other modules.  Thus making a change
#   in one place can have unforeseen effects on many other features.
#   It may takes months for you to notice these other side-effects
#   which may not seen connected at all.  It is not feasable for me to
#   provide help with modifying Consed sources because of the
#   potentially huge amount of time involved.
#
#*****************************************************************************/
#include    "editAddConsensusTag.h"
#include    "contig.h"
#include    "consed.h"
#include    "assembly.h"
#include    "tag.h"


void editAddConsensusTag :: doEditSpecific() {


   pConsensusTag_->pContig_->addConsensusTag( pConsensusTag_ );
}

void editAddConsensusTag :: undoEditSpecific() { 

   pConsensusTag_->pContig_->removeConsensusTag( pConsensusTag_ );
   delete pConsensusTag_;
}

void editAddConsensusTag :: writeEditToEditHistoryFile() {

   // make consensus tag responsible for writing to edit history file.
   // This is because different types of tags have very different 
   // information that must be put into the file.

   pConsensusTag_->writeTagToEditHistoryFile();
   pConsensusTag_->writeToEditHistoryFileAnythingSpecialForThisTagType();
}



// This is just used to show the user what is the next possible edit to
// undo for the multiple undo function.

RWCString editAddConsensusTag :: soGetDescriptionOfEdit() {


   int nUnpaddedStart = pConsensusTag_->pContig_->nUnpaddedIndex( 
                                 pConsensusTag_->nPaddedConsPosStart_ 
                                                 );

   int nUnpaddedEnd = pConsensusTag_->pContig_->nUnpaddedIndex( 
                                 pConsensusTag_->nPaddedConsPosEnd_ 
                                               );

   char szTemp[200];
   sprintf( szTemp, "%d to %d", nUnpaddedStart, nUnpaddedEnd );

   RWCString soDescription = "added " + pConsensusTag_->soType_ + " consensus tag " +
      pConsensusTag_->pContig_->soGetName() + " " +
      " from " + szTemp;

   return( soDescription );
}



void editAddConsensusTag :: refreshContigWin( ContigWin* pContigWin ) {

   // when undo'ing this action, pConsensusTag_ will no longer be
   // a valid pointer, so can't use it to find out which ContigWin's
   // to refresh so refresh them all

   pContigWin->refreshContigName();

   EditAction::refreshContigWin( pContigWin );
}