/***************************************************************************** # Copyright (C) 1994-2008 by David Gordon. # All rights reserved. # # This software is part of a beta-test version of the Consed/Autofinish # package. It should not be redistributed or # used for any commercial purpose, including commercially funded # sequencing, without written permission from the author and the # University of Washington. # # This software is provided ``AS IS'' and any express or implied # warranties, including, but not limited to, the implied warranties of # merchantability and fitness for a particular purpose, are disclaimed. # In no event shall the authors or the University of Washington be # liable for any direct, indirect, incidental, special, exemplary, or # consequential damages (including, but not limited to, procurement of # substitute goods or services; loss of use, data, or profits; or # business interruption) however caused and on any theory of liability, # whether in contract, strict liability, or tort (including negligence # or otherwise) arising in any way out of the use of this software, even # if advised of the possibility of such damage. # # Building Consed from source is error prone and not simple which is # why I provide executables. Due to time limitations I cannot # provide any assistance in building Consed. Even if you do not # modify the source, you may introduce errors due to using a # different version of the compiler, a different version of motif, # different versions of other libraries than I used, etc. For this # reason, if you discover Consed bugs, I can only offer help with # those bugs if you first reproduce those bugs with an executable # provided by me--not an executable you have built. # # Modifying Consed is also difficult. Although Consed is modular, # some modules are used by many other modules. Thus making a change # in one place can have unforeseen effects on many other features. # It may takes months for you to notice these other side-effects # which may not seen connected at all. It is not feasable for me to # provide help with modifying Consed sources because of the # potentially huge amount of time involved. # #*****************************************************************************/ #include "maybeTerminateIfAnotherReadWriteConsed.h" #include "consedParameters.h" #include using namespace std; #include #include #include #include #include #include void maybeTerminateIfAnotherReadWriteConsed() { if ( !pCP->bOnlyAllowOneReadWriteConsedAtATime_ ) return; // now this process needs to determine if it is read-write if ( pCP->bReadOnly_ ) return; if ( ( pCP->nWhatIsRunning_ == nAutoFinishIsRunning ) && !pCP->bWillDoExperiments_ ) return; FileName fil( ".consed_write_lock_do_not_delete" ); if ( !fil.bFileByThisNameExists() ) { if ( !fil.bCreateFile() ) { cerr << "You do not have write access to this directory. You can only start consed as consed -read_only" << endl; exit( 1 ); } } int nFileDescriptor = open( fil.data(), O_WRONLY ); if ( nFileDescriptor == -1 ) { fprintf( stderr, "failed to open file due to %d %s\n", errno, strerror( errno) ); exit( 1 ); } struct flock myflock; int nLockReturn; myflock.l_type = F_WRLCK; myflock.l_whence = 0; myflock.l_start = 0; myflock.l_len = 0; nLockReturn = fcntl( nFileDescriptor, F_SETLK, &myflock ); if ( nLockReturn == -1 ) { fprintf( stderr, "errno = %d %s\n", errno, strerror( errno ) ); fprintf( stderr, "There is another read-write Consed or Autofinish \nrunning in this same directory. \nIf you are trying to run Consed, you can run it read-only \nby typing \"consed -read_only\"" ); exit( 1 ); } }