/*****************************************************************************
#   Copyright (C) 1994-2008 by David Gordon.
#   All rights reserved.                           
#                                                                           
#   This software is part of a beta-test version of the Consed/Autofinish
#   package.  It should not be redistributed or
#   used for any commercial purpose, including commercially funded
#   sequencing, without written permission from the author and the
#   University of Washington.
#   
#   This software is provided ``AS IS'' and any express or implied
#   warranties, including, but not limited to, the implied warranties of
#   merchantability and fitness for a particular purpose, are disclaimed.
#   In no event shall the authors or the University of Washington be
#   liable for any direct, indirect, incidental, special, exemplary, or
#   consequential damages (including, but not limited to, procurement of
#   substitute goods or services; loss of use, data, or profits; or
#   business interruption) however caused and on any theory of liability,
#   whether in contract, strict liability, or tort (including negligence
#   or otherwise) arising in any way out of the use of this software, even
#   if advised of the possibility of such damage.
#
#   Building Consed from source is error prone and not simple which is
#   why I provide executables.  Due to time limitations I cannot
#   provide any assistance in building Consed.  Even if you do not
#   modify the source, you may introduce errors due to using a
#   different version of the compiler, a different version of motif,
#   different versions of other libraries than I used, etc.  For this
#   reason, if you discover Consed bugs, I can only offer help with
#   those bugs if you first reproduce those bugs with an executable
#   provided by me--not an executable you have built.
# 
#   Modifying Consed is also difficult.  Although Consed is modular,
#   some modules are used by many other modules.  Thus making a change
#   in one place can have unforeseen effects on many other features.
#   It may takes months for you to notice these other side-effects
#   which may not seen connected at all.  It is not feasable for me to
#   provide help with modifying Consed sources because of the
#   potentially huge amount of time involved.
#
#*****************************************************************************/
   saveColorAndCheckColormap( ColorHighlightBackground );
   saveColorAndCheckColormap( ColorHighlightForegroundX );
   saveColorAndCheckColormap( ColorMeansMatch_same );
   saveColorAndCheckColormap( ColorMeansMatch_different );
   saveColorAndCheckColormap( ColorMeansMatch_clippedEnds );
   saveColorAndCheckColormap( ColorMeansMatch_consensus );
   saveColorAndCheckColormap( ColorMeansMatch_lowQualConsensus );
   saveColorAndCheckColormap( ColorConsensusLabel );
   saveColorAndCheckColormap( ColorConsensusLabelBackground );
   saveColorAndCheckColormap( ColorMeansQualityAgree );
   saveColorAndCheckColormap( ColorMeansQualityDisagree );
   saveColorAndCheckColormap( ColorMeansQualityConsensusForeground );
   saveColorAndCheckColormap( ColorMeansQuality0_4 );
   saveColorAndCheckColormap( ColorMeansQuality5_9 );
   saveColorAndCheckColormap( ColorMeansQuality10_14 );
   saveColorAndCheckColormap( ColorMeansQuality15_19 );
   saveColorAndCheckColormap( ColorMeansQuality20_24 );
   saveColorAndCheckColormap( ColorMeansQuality25_29 );
   saveColorAndCheckColormap( ColorMeansQuality30_34 );
   saveColorAndCheckColormap( ColorMeansQuality35_39 );
   saveColorAndCheckColormap( ColorMeansQuality40_97 );
   saveColorAndCheckColormap( ColorMeansQuality98 );
   saveColorAndCheckColormap( ColorMeansQuality99 );
   saveColorAndCheckColormap( ColorMeansEditedAgree );
   saveColorAndCheckColormap( ColorMeansEditedDisagree );
   saveColorAndCheckColormap( ColorMeansEditedUnedited );
   saveColorAndCheckColormap( ColorMeansEdited98 );
   saveColorAndCheckColormap( ColorMeansEdited99 );
   saveColorAndCheckColormap( ColorVerticalScrollbarScrolledDown );
   saveColorAndCheckColormap( ColorMode_editCursorForeground );
   saveColorAndCheckColormap( ColorMode_editCursorBackground );
   saveColorAndCheckColormap( ColorTracesA );
   saveColorAndCheckColormap( ColorTracesC );
   saveColorAndCheckColormap( ColorTracesG );
   saveColorAndCheckColormap( ColorTracesT );
   saveColorAndCheckColormap( ColorTracesN );
   saveColorAndCheckColormap( ColorTracesPad );
   saveColorAndCheckColormap( ColorScale );
   saveColorAndCheckColormap( ColorScaleBackground );
   saveColorAndCheckColormap( ColorHighlightedReadNames );
   saveColorAndCheckColormap( ColorSequencingDirectionArrow );
   saveColorAndCheckColormap( ColorSequencingDirectionArrowTracesUp );
   saveColorAndCheckColormap( ColorVerticalLineAtCursor );
   saveColorAndCheckColormap( ColorHorizontalLineAtCursor );
   saveColorAndCheckColormap( ColorProteinTranslation );
   saveColorAndCheckColormap( ColorProteinTranslationLabels );
   saveColorAndCheckColormap( ColorProteinStartCodon );
   saveColorAndCheckColormap( ColorProteinStopCodon );
   saveColorAndCheckColormap( ColorUnmatchedRestrictionFragment );
   saveColorAndCheckColormap( ColorRestrictionFragmentPairTooFarApart );
   saveColorAndCheckColormap( ColorRestrictionFragmentInContig );
   saveColorAndCheckColormap( ColorRestrictionFragmentPartlyOffContig );
   saveColorAndCheckColormap( ColorRestrictionFragmentEntirelyOffContig );
   saveColorAndCheckColormap( ColorActualGelRestrictionFragment );
   saveColorAndCheckColormap( ColorRestrictionDigestScale );
   saveColorAndCheckColormap( ColorRestrictionDigestCursorIndicator );
   saveColorAndCheckColormap( ColorRestrictionFragmentsOnTopOfEachOther );
   saveColorAndCheckColormap( ColorAssemblyViewScale );
   saveColorAndCheckColormap( ColorAssemblyViewScaleNumbers );
   saveColorAndCheckColormap( ColorAssemblyViewContigs );
   saveColorAndCheckColormap( ColorAssemblyViewContigNamesForeground );
   saveColorAndCheckColormap( ColorAssemblyViewContigNamesBackground );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentFwdRevPairs );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentFwdRevPairDepth );
   saveColorAndCheckColormap( ColorAssemblyViewReadDepth );
   saveColorAndCheckColormap( ColorAssemblyViewDiscrepanciesNotIndels );
   saveColorAndCheckColormap( ColorAssemblyViewDiscrepanciesIndels );
   saveColorAndCheckColormap( ColorAssemblyViewTooFewConsistentFwdRevPairs );
   saveColorAndCheckColormap( ColorAssemblyViewInconsistentFwdRevPair );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentGapSpanningFwdRevPair );
   saveColorAndCheckColormap( ColorAssemblyViewHighlight );
   saveColorAndCheckColormap( ColorAssemblyViewMultipleItemsOnTopOfEachOther );
   saveColorAndCheckColormap( ColorAssemblyViewDirectSequenceMatches );
   saveColorAndCheckColormap( ColorAssemblyViewInvertedSequenceMatches );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment1 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment2 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment3 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment4 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment5 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment6 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment7 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment8 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment9 );
   saveColorAndCheckColormap( ColorAssemblyViewConsistentRestrictionDigestFragment10 );
   saveColorAndCheckColormap( ColorAssemblyViewInconsistentRestrictionDigestFragment );
   saveColorAndCheckColormap( ColorAssemblyViewCloneEnd );
   saveColorAndCheckColormap( ColorReadPrefixDefault );