LOCUS NZ_ACVX01000063 5014 bp DNA linear CON 10-NOV-2010 DEFINITION Clostridium thermocellum DSM 2360 ctg00010, whole genome shotgun sequence. ACCESSION NZ_ACVX01000063 NZ_ACVX00000000 VERSION NZ_ACVX01000063.1 GI:256006098 KEYWORDS WGS. SOURCE Clostridium thermocellum DSM 2360 ORGANISM Clostridium thermocellum DSM 2360 Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. COMMENT PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from ACVX01000063. FEATURES Location/Qualifiers source 1..5014 /organism="Clostridium thermocellum DSM 2360" /mol_type="genomic DNA" /strain="DSM 2360" /isolation_source="contaminant of Clostridium thermocellum strain LQ8" /db_xref="taxon:572545" gene <1..901 /locus_tag="ClothDRAFT_2890" CDS <1..901 /locus_tag="ClothDRAFT_2890" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: hypothetical protein" /codon_start=2 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431029.1" /db_xref="GI:256006099" /translation="IYTDPYKFNTALEVATVVAGWTGGVGVPIVHTLIMMAWAMAESL FDVYLLLKGDSVPIFKTRNTWITDIDGFSKIITNEIVENTKNIARNAAKQVIDYTENK VEDFLKSASITISDYIDSKVDLLVDKAFASIENPLKENMYSAENIFSDFEASVYFNGE GEIGDIMNQISNEVQVLLQEEMKIVENSTLGSYVPEIILGVDYTDFLQEYKNRNLKEV IAELTVELAEGKELLGYNVDETSKKINSMIFNTIQKAKNEVKLNIKTKIREYKKDLIE KFEKNLKKQLRKEKKKLINLLIL" gene 958..1227 /locus_tag="ClothDRAFT_2891" CDS 958..1227 /locus_tag="ClothDRAFT_2891" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431030.1" /db_xref="GI:256006100" /translation="MKYVDYLRLFLLFTDKDVKIKRIADLIQVNMRNVSGNKTFKMSE CSTYMRIESSVSIKYLFATKPFMPKEFRTEDGKRIELDVVLYKGY" gene 1264..1857 /locus_tag="ClothDRAFT_2892" CDS 1264..1857 /locus_tag="ClothDRAFT_2892" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431031.1" /db_xref="GI:256006101" /translation="MNKAKVIFVMIIFCTISLLAACGGDEVKKNHSIGEPKTDLSQST HGIGDKEVKTNAEKFLEYVIDATDKRDFTKTGDYAGVLSTLGSEYKEDIINPYTGGKL LTKANRTKDLLYAEHWVASNVSSVDCIVIDDYMTLLEELDTSEVVYCLNAESKGCVIG IILMDGVYIYEVDENGEKINEIKHFFKKDNKKDNKGE" sig_peptide 1264..1335 /locus_tag="ClothDRAFT_2892" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probabilty 0.977) with cleavage site probability 0.433 at residue 24" gene 1802..1912 /locus_tag="ClothDRAFT_2893" CDS 1802..1912 /locus_tag="ClothDRAFT_2893" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431032.1" /db_xref="GI:256006102" /translation="MKLNTFLKKIIKKIIKENKVISLYVNKDYSKMEGLK" gene 1909..2718 /locus_tag="ClothDRAFT_2894" CDS 1909..2718 /locus_tag="ClothDRAFT_2894" /inference="protein motif:PFAM:PF07833" /note="PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein" /codon_start=1 /transl_table=11 /product="copper amine oxidase domain protein" /protein_id="ZP_05431033.1" /db_xref="GI:256006103" /db_xref="InterPro:IPR012854" /translation="MRKSAKLILTIFIVTILFSNITFAINIPLRVVVNGEELYFPDEK PFIDANGRTQTPARFIGEALGATVTWDGNAKKAVFKMSGTTLELLIGKREYQLNGQKK QMDTEALLINGRTFVPARYVAEAFGATVRWKDEIKTVYIDTNKTGKVEVEGDTREVAG FIVPKGIDLMVAGADEDYSYEATFTISFLRKNVEKQKDDMEKILLQRLSEETVKEIMS LVRSKVKDTDVIEARYFYDEKTGQYLHLAKSWPMRGSTISLYIYKKGFKPF" sig_peptide 1909..1983 /locus_tag="ClothDRAFT_2894" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probabilty 0.817) with cleavage site probability 0.798 at residue 25" misc_feature 2056..2331 /locus_tag="ClothDRAFT_2894" /note="Copper amine oxidase N-terminal domain; Region: Cu_amine_oxidN1; pfam07833" /db_xref="CDD:149091" gene 2762..>5014 /locus_tag="ClothDRAFT_2895" CDS 2762..>5014 /locus_tag="ClothDRAFT_2895" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431034.1" /db_xref="GI:256006104" /translation="MKKILCCIISLFVLASYLSTYTYAISYNSAKEAIDDANNFLLEK MGYENYYSLEVNGMNINDKLAQYGLDVFSNRPVFVYGDNVEASKKTTTAGRDMVKKVN GKDEYRALGYAVDGSVFPNPSFPYDNEGHAAKDKMWVKEPWNGSKVKYLYSENGNIVK RTLTDNAFQYIEKWIKFTSFKPHEVEACTGKKNYFVQNAVDVPEGLKENFEDFLYIIQ PPTEHAWGLGIAFYYWNGFNNLNYRSFLIRPFDMNDDLDVSFHVIPDSSTEGNEVLVG VKVKSHFDTDLEGVKFRWSITTKNSDGQDVPLDADAYELEFGGSSTSQSGTINISAED KEACLYAGFRMPNTDVYIEFAINEDGENPLENDLKNNIVSTVVKAEKPINSTLRKFDL PYYALSREISYPLADSDIVFNLNNINGDWLDGSARIDKLNVNVNAGFLHNYQVGSSRI EDNENTITVSLPSVKAKVERKDFGDNPGEKKWLVSNNTVDVIKRILDTSYYLSVSKKY RYRIKCNIHEDCEAEGCSGYKNEIGNVSSSRSGNAPIEINTYVYNGKKDLKKKEYENK ISNNYDKDFKAKILWTNNPIKFDVIRYMFHLDAAGNPKTWEAVPGRYQREFVQQCSAD IDWNVTSSIKQEYEQDREAARQGKRGQAFYNKVVFATDKNLISYDYPIKSGYYFNPAG KYTFEVTTVNYKTGQGKTKEHEELVNALINSFRYESNLIYINGSNQAVNIANGSYKTP GILTAKNNKGI" sig_peptide 2762..2836 /locus_tag="ClothDRAFT_2895" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.671 at residue 25" ORIGIN 1 tatatatacg gatccatata agtttaatac tgcattagag gttgctaccg ttgtggctgg 61 gtggaccggc ggtgtaggtg taccaattgt acatacattg attatgatgg cttgggcaat 121 ggctgagtct ttgtttgatg tgtacctgct gttgaaaggg gatagtgtac cgatatttaa 181 aacgagaaat acgtggataa cggatattga tgggttttct aaaataatta caaatgaaat 241 tgtagaaaat acaaaaaata tagcacggaa tgcagctaag caagttattg actatacaga 301 aaataaagta gaagattttc taaaaagtgc aagtataact atttctgatt acattgattc 361 taaagttgac ctgttggttg ataaagcttt tgcaagtatt gaaaatcctt taaaagaaaa 421 tatgtattcg gctgaaaata tttttagcga ttttgaagca agcgtatact ttaatggtga 481 aggtgaaata ggagatataa tgaatcaaat tagcaacgaa gttcaagttt tgcttcaaga 541 agaaatgaaa attgttgaga atagtacttt gggtagctat gtgcctgaaa ttattctggg 601 agtagattat acagattttt tgcaagaata taaaaataga aatcttaaag aggtaattgc 661 tgagttgact gttgaacttg cggaaggaaa ggagttgctt ggatataatg tagatgaaac 721 tagcaaaaaa ataaatagca tgatttttaa tactattcaa aaagcaaaaa atgaagtgaa 781 acttaatata aaaacaaaaa ttagagagta taagaaagat ttaattgaaa aatttgaaaa 841 aaatttaaag aaacagctga gaaaggaaaa gaagaagttg ataaatttat tgattctata 901 ggtaatacaa gtgattcaga agtaatgaaa acaaacctta aagggtcttt tctctccatg 961 aaatacgttg attaccttag gttatttcta ctttttacag acaaagatgt gaaaataaaa 1021 agaatagctg atttgattca agtgaatatg agaaatgtat ctgggaataa aacttttaaa 1081 atgtcagaat gtagtacgta tatgcgtatt gaatcttcag tttctataaa atatttgttt 1141 gcgacaaaac cttttatgcc aaaagagttc agaaccgaag atggaaaaag aatagagtta 1201 gatgttgtcc tgtataaagg atattaacga aaaataattt tagaaggaaa ggaatgttgt 1261 ggaatgaaca aagcaaaagt aatttttgta atgattattt tttgtactat ttctttatta 1321 gctgcttgtg gaggtgatga ggtaaaaaag aaccattcta ttggagaacc aaaaacagat 1381 ttgtcacaaa gtacacatgg tataggggat aaagaagtaa agacaaatgc ggaaaaattt 1441 ttagaatatg ttattgatgc tacagacaag agagatttta caaaaaccgg tgattatgcg 1501 ggagttctaa gcacattagg aagcgaatat aaagaagata ttataaatcc atatactggt 1561 ggaaaattat taacaaaagc gaatagaact aaagacttgc tatatgctga acattgggtg 1621 gcatctaatg tatctagtgt tgattgcatt gtaattgatg attatatgac attgctcgaa 1681 gaattagata cttctgaagt agtttactgc ttaaacgctg aaagcaaagg ttgcgtaata 1741 ggaattatat taatggatgg tgtatacata tatgaagttg atgaaaatgg tgagaaaata 1801 aatgaaatta aacacttttt taaaaaagat aataaaaaag ataataaagg agaataaggt 1861 tatcagtctc tatgttaata aagactatag taaaatggag ggcttaaaat gagaaaatct 1921 gcaaaattaa tattaacaat atttatagta actatacttt tttcaaatat cacttttgcg 1981 attaatatac cgcttcgtgt ggttgtaaat ggagaagagt tgtattttcc ggatgagaag 2041 ccgttcatcg atgcgaatgg aaggacgcag acaccagcaa ggtttattgg agaagctttg 2101 ggagcaacag taacgtggga tggaaatgcg aaaaaagcag tatttaaaat gagtggaacg 2161 acattggagt tgcttattgg gaaaagagaa tatcagttga acggtcaaaa gaagcaaatg 2221 gatacggaag cgttattgat aaatggaagg acatttgtac cggcccgtta tgtggcggaa 2281 gcatttggtg caactgttag gtggaaagat gaaattaaaa ctgtgtacat agatacaaac 2341 aagacaggaa aagtggaagt tgaaggcgat acaagggaag tagccgggtt tattgtaccg 2401 aaaggtattg atttaatggt tgcgggtgca gatgaagatt atagctatga agcaacgttt 2461 acgatatctt ttttgagaaa gaatgttgaa aaacagaaag atgatatgga gaaaatattg 2521 ttacaaaggt tgagtgaaga gacggtaaaa gagattatga gtcttgtgag gtcaaaggta 2581 aaggatacgg atgttattga agcaaggtat ttttatgacg aaaagacagg ccaatatttg 2641 catttagcta agtcatggcc aatgagagga tctacaattt ctttgtatat atataaaaaa 2701 ggattcaaac ctttttagaa catgagagta gatttctgag gctctgaggg ggcaaaatac 2761 gatgaaaaaa atattatgtt gtatcatatc gttatttgtt ttagcatcgt atttgagtac 2821 atatacatat gcaataagct ataatagtgc aaaagaagca atagatgatg ctaataattt 2881 tttattagaa aaaatgggct atgagaatta ctattcatta gaagtaaatg gtatgaatat 2941 aaatgataaa cttgcacaat atggtttgga tgtgttttca aacaggccag tatttgtata 3001 cggtgataat gtagaagcta gtaaaaagac aacgacagca gggcgagata tggttaaaaa 3061 agttaatggt aaggacgaat accgtgcttt agggtatgca gtggatggtt ctgtttttcc 3121 aaatccctct tttccatatg ataatgaggg tcatgctgca aaagataaga tgtgggttaa 3181 agaaccatgg aatggttcaa aagtaaaata tctatatagc gagaatggaa atattgtaaa 3241 gagaacgtta acggataatg cttttcagta tatagaaaaa tggatcaagt ttaccagttt 3301 taaacctcat gaagttgaag cttgtacagg taagaaaaac tattttgtac aaaatgcagt 3361 tgatgtaccg gaaggattaa aggaaaattt tgaagacttt ttatatataa tacaacctcc 3421 aacagaacat gcgtggggac tcggtatagc attttactac tggaatggat ttaataatct 3481 caactataga tcttttctca ttaggccgtt tgatatgaat gatgatttgg atgttagttt 3541 ccatgtaata ccagatagtt caaccgaagg caacgaagta ttggttggtg taaaagttaa 3601 atctcacttc gatacagact tagaaggagt taaatttagg tggagtatta ctacaaaaaa 3661 cagcgatggt caagatgttc cgttggatgc tgatgcttat gaacttgaat ttggaggttc 3721 gtcaaccagt cagagcggga ctataaatat atcagcagaa gacaaggaag catgtttata 3781 tgctgggttt agaatgccca atactgatgt atatatagaa tttgcaatta atgaagacgg 3841 agaaaatcct ttagaaaatg atttgaaaaa taatattgtt tctacagtgg ttaaagccga 3901 aaagcctata aattctactc ttaggaaatt tgatttacca tactatgcat tatcgagaga 3961 aataagctat ccattagctg attcagatat tgtatttaat ctaaacaata ttaatggtga 4021 ttggctggat ggaagtgcca gaatagataa attgaatgtt aatgtaaatg caggattttt 4081 gcataattat caagttggaa gttcgaggat tgaagataac gaaaatacaa taactgtaag 4141 tttgccaagc gtgaaagcaa aggtcgaaag gaaagatttt ggagataatc ctggagagaa 4201 gaagtggttg gtcagcaaca acactgttga tgtaataaaa agaattctag atacatctta 4261 ttatctttct gtatctaaaa aatatagata taggattaaa tgcaatatac atgaagattg 4321 tgaggccgaa ggttgttcgg gttataagaa cgaaatagga aatgtaagca gcagccgaag 4381 tggtaatgct ccaatagaaa taaatacata tgtctacaac ggcaaaaagg atttgaagaa 4441 aaaagagtat gaaaataaaa taagcaataa ttatgacaaa gactttaaag cgaaaatact 4501 atggacaaac aatcctatta aattcgatgt aatacgctat atgttccact tggatgcagc 4561 cggtaatcca aagacatggg aagcagtgcc cggcagatat caaagggaat ttgtccagca 4621 gtgtagtgcg gacattgact ggaatgtaac cagctcaata aaacaggagt acgaacaaga 4681 ccgggaagcg gcacgccaag gaaaacgagg ccaggcattt tataacaaag tagtatttgc 4741 aacagataaa aatctcataa gttatgatta tccaataaaa tcgggctact actttaatcc 4801 ggcgggtaaa tatacttttg aagttacaac cgttaactac aagaccggcc agggtaagac 4861 aaaagagcat gaggagctgg taaatgcatt aattaactcc tttagatatg aatcaaactt 4921 gatatatatt aatggcagca accaggctgt gaacattgca aatggatcat acaaaactcc 4981 gggaatattg actgcaaaaa acaacaaagg tatt //