LOCUS NZ_ACVX01000070 3405 bp DNA linear CON 10-NOV-2010 DEFINITION Clostridium thermocellum DSM 2360 ctg00011, whole genome shotgun sequence. ACCESSION NZ_ACVX01000070 NZ_ACVX00000000 VERSION NZ_ACVX01000070.1 GI:256006139 KEYWORDS WGS. SOURCE Clostridium thermocellum DSM 2360 ORGANISM Clostridium thermocellum DSM 2360 Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. COMMENT PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from ACVX01000070. FEATURES Location/Qualifiers source 1..3405 /organism="Clostridium thermocellum DSM 2360" /mol_type="genomic DNA" /strain="DSM 2360" /isolation_source="contaminant of Clostridium thermocellum strain LQ8" /db_xref="taxon:572545" gene <1..1187 /locus_tag="ClothDRAFT_2924" CDS <1..1187 /locus_tag="ClothDRAFT_2924" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: viral A-type inclusion protein" /codon_start=3 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431063.1" /db_xref="GI:256006140" /translation="ATVVAGWTGGVGVPIVHTLIMMAWAMAESLFDVYLLLKGESIPI FKTRNTWITDIKGLSTTITNEIIYEAKNKAKNAAELVIDYTENKAEEFLEKAGIAISD YIDSKIDLLVDKAFASIENPFKEGKYSAENIFNDLEASLNVKVEGEVGDIMSEISSKI QTLLLEQMKSVENSTIGDYVPVTIQGIDYTDFLEVYKNKNLKEAIAELTAMLAEGKEL FGYSVEETSKKVNSMIFNTIQEAKKKVKNNIKAGIENYRENLVNKFKETFQKVAEKGK EEVNKFIDSIGNTNDSEVMKTNLKGSFLSMKYADYLRLFLLFTEKEVKMRRIADLIQV NMRTISRDKTFKMSECSTYMRIESSVSIKYLFATKPFIPKEFRTEDGKRIKFDVILYK GY" gene 1231..1824 /locus_tag="ClothDRAFT_2925" CDS 1231..1824 /locus_tag="ClothDRAFT_2925" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431064.1" /db_xref="GI:256006141" /translation="MLKMVRVRSILVAMVICVTVLLTACGDNGKGDNQPSNTPSNEKP IQSTQEIKNGKEKTNAEKFLDYVIEAAYLRKFTETGDYAGIAVTLHDIYKEDIVNPYT GGKRLYVMNRTRSYMKNSSASITGSLGVDCVVIDDYMTDLKEIDTNEVVYCVNQESKG MVIGFIFKDGVYIYEIDENGNKINEIKHFFKKEEKEE" sig_peptide 1231..1305 /locus_tag="ClothDRAFT_2925" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probabilty 0.972) with cleavage site probability 0.513 at residue 25" gene 1867..2838 /locus_tag="ClothDRAFT_2926" CDS 1867..2838 /locus_tag="ClothDRAFT_2926" /inference="protein motif:PFAM:PF07833" /note="PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein" /codon_start=1 /transl_table=11 /product="copper amine oxidase domain protein" /protein_id="ZP_05431065.1" /db_xref="GI:256006142" /db_xref="InterPro:IPR012854" /translation="MKRIAKILTIVLIVTFLLSLPTSAVELPIRVVVNGTKINFPDAE PFIDENSRTQVPIRFVGEALGANVSWDGNTKKVTITLNGKKVVLQIGNKNYEVNGQQK QMDTVALLKESRTFVPVRFVSEALGATVKWNANIRTVYIDMNGEVTPSPEPAGGTVKY YDGIAFNDVTDVDQYGRIKVEKLKEFLLKLADQLRFVKENGKYYIECTYPEKPEGYEW GLGIRVSNKDGTYITYSQVGRNPKWLIPSEGAFKKEASDITDINKVKLINIVISLDHP KNDSLGILNIVYYMDKSEMRAKFVPESGTIPSENYSETFNFKKMFQW" sig_peptide 1867..1941 /locus_tag="ClothDRAFT_2926" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 at residue 25" misc_feature 2011..2289 /locus_tag="ClothDRAFT_2926" /note="Copper amine oxidase N-terminal domain; Region: Cu_amine_oxidN1; pfam07833" /db_xref="CDD:149091" gene 2859..>3405 /locus_tag="ClothDRAFT_2927" CDS 2859..>3405 /locus_tag="ClothDRAFT_2927" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431066.1" /db_xref="GI:256006143" /translation="MRKRTGYIILFVLTIYNFFSYSFYDCDKVNAQTPKIEVLIEGVD EQPKGKIIGVYGPFTKGIELWHYSGGYWGYKSLIIRDEDLDGDLNDEEALAKAINEKI TFDYTIDEDLYKKLIEEGDIKIVCSTALKDEETMENKSILDLFYDKPRIEIKDGKIYF SAKPKFHFFDKKQIDYQAIIGE" ORIGIN 1 ttgctaccgt tgtggctggg tggaccggtg gtgtaggtgt accgatagtg cacacattaa 61 ttatgatggc ttgggcaatg gctgagtctt tgtttgatgt atatttgttg ttaaaggggg 121 agagtatacc aatatttaaa acgagaaata catggataac ggatataaaa ggactttcga 181 caacaattac aaatgaaatt atttatgaag ctaaaaataa ggcaaaaaat gctgcagagc 241 ttgttattga ctatacagag aataaagcag aggaattttt agaaaaagct ggaattgcca 301 tatcagatta tattgactct aagatagatt tactggtaga taaggctttt gctagcattg 361 aaaatccttt taaggaaggt aaatattctg cagaaaatat ttttaatgat ttagaagcaa 421 gtttaaatgt aaaagttgaa ggagaagtag gagatataat gagtgaaatt agcagtaaaa 481 ttcaaacttt acttctcgaa cagatgaaat ctgtagaaaa tagtactata ggtgactatg 541 tgcctgttac tattcaagga attgattata cagactttct tgaagtatac aagaataaaa 601 atcttaaaga agctatagct gagttaactg caatgctcgc agaagggaaa gagttatttg 661 gttatagtgt ggaagagaca agtaaaaaag tgaacagtat gatttttaat actattcagg 721 aagctaaaaa gaaagtaaag aataatataa aagcaggaat tgagaattat agagaaaatt 781 tggttaataa gtttaaagaa acatttcaaa aagttgctga gaaaggaaaa gaagaagtaa 841 ataaatttat tgattctata ggaaatacaa atgattcaga ggtaatgaaa acaaacctca 901 aagggtcttt tctatcgatg aaatatgctg attatctaag attattttta ctttttacag 961 aaaaagaggt gaagatgaga aggatagctg atttgataca ggtaaatatg cggactattt 1021 caagagataa aacttttaaa atgtcggagt gtagtaccta tatgcgtatt gaatcttcag 1081 tttcgataaa atatttgttt gcaacaaaac cttttattcc gaaggaattc aggactgaag 1141 atggaaaaag aataaagttt gatgttatcc tatataaggg atattgacat atgaaagtta 1201 taattaaaag ataatttaaa aagggaaggg atgttgaaaa tggttagagt gcgttcaata 1261 ttagtagcaa tggtaatatg tgttacggtc ttattaacag cttgtggtga caatggaaaa 1321 ggggataatc aaccttctaa tacaccgtca aatgagaaac caatacaaag tacacaggag 1381 ataaaaaatg gaaaagaaaa aactaatgcg gaaaaatttt tggattatgt tatagaggct 1441 gcttatttaa ggaaatttac tgaaactggt gattatgcag gaattgcggt tacattacat 1501 gatatataca aagaggatat tgttaatcct tataccggag gtaaaaggtt atatgttatg 1561 aatagaacaa gaagttatat gaaaaatagt agtgcatcta taacaggaag cctaggcgta 1621 gattgtgtag taatagatga ttatatgact gatttaaaag aaatagacac aaatgaagtt 1681 gtttattgtg taaatcagga aagtaaaggg atggttattg gatttatatt taaagatggt 1741 gtatacatat atgaaattga cgaaaatggc aataaaataa atgaaatcaa gcatttcttt 1801 aaaaaagaag aaaaagaaga ataaagcttt tgtgtatgta acatatatgt aggagggaaa 1861 gctgaaatga aaagaatcgc aaaaatatta acaatagtat taatagttac attcttgtta 1921 tcattaccaa catcagcagt tgagcttcca attcgagtag tggtgaatgg aacaaagata 1981 aattttccag atgcagagcc gtttattgat gagaattcaa gaacacaggt gcctatcaga 2041 tttgttggag aagctctggg ggcgaatgta agttgggacg gaaatacaaa aaaagtgaca 2101 ataacattaa acggaaaaaa agtagtgctt cagataggga ataaaaacta tgaagtaaac 2161 ggacaacaga agcaaatgga tacagtggca ttattaaaag aatccagaac ttttgttcca 2221 gtaaggtttg tgagtgaagc attgggagca actgtaaagt ggaatgcaaa tataagaaca 2281 gtatatattg acatgaatgg tgaggtaaca ccttctcctg aaccggcagg aggaacagta 2341 aaatattatg acggaatagc atttaatgat gttaccgatg ttgaccagta tggaagaata 2401 aaggttgaaa aattgaagga atttttgctc aagttagcag atcagctgag atttgtaaag 2461 gaaaacggaa aatattatat tgaatgcaca tatccagaga aacctgaagg ttatgagtgg 2521 ggattaggta taagagtttc taataaggac ggtacttata tcacatattc tcaagtaggg 2581 cgtaatccaa aatggctaat accatcagaa ggggcattta aaaaggaagc ttcagatatt 2641 actgatataa ataaagtaaa attgatcaat attgtaattt cactagatca tccaaaaaac 2701 gatagcttgg gaatattgaa tatagtttat tatatggaca aatcagagat gagagctaaa 2761 tttgtaccag aatcaggaac tataccttcg gagaattatt cagagacgtt taattttaaa 2821 aaaatgtttc aatggtagaa tgattagggg gcaaaattat gcgcaaaaga actggctata 2881 taatattatt tgtactaaca atttataact ttttttctta tagtttttat gattgtgaca 2941 aagtaaatgc gcaaacaccc aaaattgaag ttcttatcga gggcgttgat gagcaaccaa 3001 agggtaaaat aattggtgtg tatgggcctt ttacaaaggg aatcgaatta tggcactata 3061 gtggcggtta ttgggggtac aaaagtttaa taataagaga tgaggatttg gatggcgatt 3121 taaacgatga ggaagcactt gctaaagcaa ttaatgaaaa aattacgttc gattatacta 3181 ttgacgaaga cctttataaa aaattaatag aagagggaga tataaagatt gtatgttcaa 3241 ctgcattaaa agatgaagaa accatggaaa ataaatctat tttagatttg ttttatgata 3301 agccaagaat agaaattaag gatggaaaaa tatatttttc tgccaagcct aaatttcatt 3361 tttttgataa gaaacagata gattaccagg ctataatagg agaaa //