TUTORIAL: Genome Assembly

Preprocessing of sequencing reads

November 4, 2021

Sequencing read files

DATASET: Fakankun I et al. Ph.D. thesis, University of Manitoba (in progress) Rhodosporidium diobovatum.
This dataset is a random sample of about 5% of the reads from fungal genomic DNA.
NCBI BioSample SAMN09284860

raw read files (Illumina, paired end)	insert size (nt)
DL300_S1_L001_R1_001_sample.fastq.gz DL300_S1_L001_R2_001_sample.fastq.gz	300
DL400_S2_L001_R1_001_sample.fastq.gz DL400_S2_L001_R2_001_sample.fastq.gz	400
DL700_S3_L001_R1_001_sample.fastq.gz DL700_S3_L001_R2_001_sample.fastq.gz	700