public final class SequenceList extends javax.swing.JList implements SequenceCanvasObject
javax.swing.JList.AccessibleJList, javax.swing.JList.DropLocation
javax.swing.JComponent.AccessibleJComponent
Modifier and Type | Field and Description |
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protected SequenceCanvas |
canvas
Canvas object which owns this SequenceList instance.
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protected Dataset |
datamodel
Used for the relationship between the data model and the list.
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static int |
DBL_CLICK_TIME
The amount of time (ms) between clicks to be considered a double click.
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javax.swing.AbstractAction |
getInfoAction
The menu item "Get info..."
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javax.swing.AbstractAction |
groupAction
Action for grouping sequences in the canvas
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protected javax.swing.JPopupMenu |
popup
The right click menu for the Sequence sequence list.
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javax.swing.AbstractAction |
selectAllAction
The menu item "Select All"
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javax.swing.AbstractAction |
selectByNameAction
The abstract action "Select sequence by name"
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javax.swing.AbstractAction |
selectGroupAction
The menu item "Select group"
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javax.swing.AbstractAction |
ungroupAction
Action for ungrouping/degrouping sequences in the canvas
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listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW
Constructor and Description |
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SequenceList(SequenceCanvas canvas,
Dataset datamodel)
Constructs a new SequenceList
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Modifier and Type | Method and Description |
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void |
changeCase()
Changes the case of the currently selected sequence.
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void |
deleteSelection()
Deletes the currently selected sequences.
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void |
readIn(DataFormat format,
java.util.Scanner source,
boolean overwrite)
Reads data into the sequence list.
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void |
writeOut(DataFormat fmt,
java.lang.Appendable dest)
Writes the selected sequences out to an appendable object
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addListSelectionListener, addSelectionInterval, clearSelection, createSelectionModel, ensureIndexIsVisible, fireSelectionValueChanged, getAccessibleContext, getAnchorSelectionIndex, getCellBounds, getCellRenderer, getDragEnabled, getDropLocation, getDropMode, getFirstVisibleIndex, getFixedCellHeight, getFixedCellWidth, getLastVisibleIndex, getLayoutOrientation, getLeadSelectionIndex, getListSelectionListeners, getMaxSelectionIndex, getMinSelectionIndex, getModel, getNextMatch, getPreferredScrollableViewportSize, getPrototypeCellValue, getScrollableBlockIncrement, getScrollableTracksViewportHeight, getScrollableTracksViewportWidth, getScrollableUnitIncrement, getSelectedIndex, getSelectedIndices, getSelectedValue, getSelectedValues, getSelectedValuesList, getSelectionBackground, getSelectionForeground, getSelectionMode, getSelectionModel, getToolTipText, getUI, getUIClassID, getValueIsAdjusting, getVisibleRowCount, indexToLocation, isSelectedIndex, isSelectionEmpty, locationToIndex, paramString, removeListSelectionListener, removeSelectionInterval, setCellRenderer, setDragEnabled, setDropMode, setFixedCellHeight, setFixedCellWidth, setLayoutOrientation, setListData, setListData, setModel, setPrototypeCellValue, setSelectedIndex, setSelectedIndices, setSelectedValue, setSelectionBackground, setSelectionForeground, setSelectionInterval, setSelectionMode, setSelectionModel, setUI, setValueIsAdjusting, setVisibleRowCount, updateUI
addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, hide, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingOrigin, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update
add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusDownCycle, validate, validateTree
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
protected Dataset datamodel
protected SequenceCanvas canvas
public static final int DBL_CLICK_TIME
public final javax.swing.AbstractAction selectGroupAction
public final javax.swing.AbstractAction getInfoAction
public final javax.swing.AbstractAction selectAllAction
public final javax.swing.AbstractAction selectByNameAction
public final javax.swing.AbstractAction groupAction
public final javax.swing.AbstractAction ungroupAction
protected final javax.swing.JPopupMenu popup
public SequenceList(SequenceCanvas canvas, Dataset datamodel)
canvas
- the sequence canvas parent to the sequence list object.datamodel
- the data model object storing the sequence data.public void changeCase()
xYzJWwa23 --- will become ---> WYZJWWA23
changeCase
in interface SequenceCanvasObject
public void deleteSelection()
deleteSelection
in interface SequenceCanvasObject
public void readIn(DataFormat format, java.util.Scanner source, boolean overwrite) throws java.io.IOException
readIn
in interface SequenceCanvasObject
format
- the file format to write the data in.source
- the data source to read data from.overwrite
- whether to overwrite the data currently selected
in the canvas object.java.io.IOException
- throws an IOException if there is any error
reading data from the Scanner object.public void writeOut(DataFormat fmt, java.lang.Appendable dest) throws java.io.IOException
writeOut
in interface SequenceCanvasObject
fmt
- the format to write the data in.dest
- the destination Appendable object to write the data.java.io.IOException
- throws an IOException if there is any error
appending the data to the Appendable object.Copyright © 2008-2022 University of Manitoba.