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Lecture 3, part 1 of 2
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September 21, 2017

WORKING WITH  SEQUENCES


Learning Checklist:

1. Be familiar with how DNA, RNA and protein sequences are represented in the common sequence file formats. Be able to explain the differences between the formats discussed, and the advantages or disadvantages of each. Be able to explain the meaning of how sequence features are represented in the GenBank Features Table.

2. Gain an understanding of how to work with sequences, based on the following concepts:

3. Learn how to use the BioLegato interface to manipulate sequences and run sequence programs.



A. Sequence Files
B. Basic shell scripting for sequences
C. BioLegato Overview

D. Working sequences in BioLegato


last  page PLNT4610/PLNT7690 Bioinformatics
Lecture 3, part 1 of 2
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