Uses of Class
org.biojava.utils.regex.Pattern

Packages that use Pattern

org.biojava.utils.regex

This package is used to perform regular expression searches of SymbolLists defined in arbitrary Alphabets.

Uses of Pattern in org.biojava.utils.regex

Methods in org.biojava.utils.regex that return Pattern

Pattern	PatternFactory.compile(String pattern) Returns a Pattern object that applies the specified regex against SymbolLists in the Alphabet that this PatternFactory was defined against.
Pattern	PatternFactory.compile(String pattern, String label) Returns a Pattern object that applies the specified regex against SymbolLists in the Alphabet that this PatternFactory was defined against.
Pattern	Matcher.pattern() Returns the Pattern object that compiled this Matcher.

Methods in org.biojava.utils.regex with parameters of type Pattern

boolean

Search.Listener.reportMatch(SymbolList seq, Pattern pattern, int start, int end)