org.biojavax.bio.seq
Class PositionResolver.AverageResolver

java.lang.Object
  org.biojavax.bio.seq.PositionResolver.AverageResolver

All Implemented Interfaces:

PositionResolver

Enclosing interface:

PositionResolver

public static class PositionResolver.AverageResolver
extends Object
implements PositionResolver

The minimal resolver returns the base which provides the average range, halfway between maximal and minimal.

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojavax.bio.seq.PositionResolver

PositionResolver.AverageResolver, PositionResolver.MaximalResolver, PositionResolver.MinimalResolver

Constructor Summary

PositionResolver.AverageResolver()

Method Summary

int	getMax(Position e) Resolves the maximum possible base for this position. ALWAYS RETURNS e.getStart()+e.getEnd() / 2
int	getMin(Position s) Resolves the minimum possible base for this position. ALWAYS RETURNS s.getStart()+s.getEnd() / 2

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PositionResolver.AverageResolver

public PositionResolver.AverageResolver()

Method Detail

getMin

public int getMin(Position s)

Resolves the minimum possible base for this position. ALWAYS RETURNS s.getStart()+s.getEnd() / 2

Specified by:

getMin in interface PositionResolver

Parameters:

s - the position to resolve

Returns:

the minimum possible base this resolver can return.

getMax

public int getMax(Position e)

Resolves the maximum possible base for this position. ALWAYS RETURNS e.getStart()+e.getEnd() / 2

Specified by:

getMax in interface PositionResolver

Parameters:

e - the position to resolve

Returns:

the maximum possible base this resolver can return.