Uses of Interface
org.biojavax.CrossReferenceResolver

Packages that use CrossReferenceResolver

org.biojavax	The Biojava extensions packages, classes that extend the core biojava functionality
org.biojavax.bio.db.biosql	Interface between biojava and biosql databases
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.

Uses of CrossReferenceResolver in org.biojavax

Classes in org.biojavax that implement CrossReferenceResolver

class

DummyCrossReferenceResolver A simple implementation of CrossReferenceResolver.

Methods in org.biojavax that return CrossReferenceResolver

static CrossReferenceResolver

RichObjectFactory.getDefaultCrossReferenceResolver() Returns the default cross ref resolver object.

Methods in org.biojavax with parameters of type CrossReferenceResolver

static void

RichObjectFactory.setDefaultCrossReferenceResolver(CrossReferenceResolver crr) Sets the default crossref resolver to use when resolving remote entries.

Uses of CrossReferenceResolver in org.biojavax.bio.db.biosql

Classes in org.biojavax.bio.db.biosql that implement CrossReferenceResolver

class

BioSQLCrossReferenceResolver A simple implementation of CrossReferenceResolver

Uses of CrossReferenceResolver in org.biojavax.bio.seq

Methods in org.biojavax.bio.seq with parameters of type CrossReferenceResolver

void	SimpleRichLocation.setCrossRefResolver(CrossReferenceResolver r) Sets the cross ref resolver to use when retrieving remote symbols.
void	RichLocation.setCrossRefResolver(CrossReferenceResolver r) Sets the cross ref resolver to use when retrieving remote symbols.
void	EmptyRichLocation.setCrossRefResolver(CrossReferenceResolver r) Sets the cross ref resolver to use when retrieving remote symbols. This method is ignored in the empty location because there is nothing to resolve.
void	CompoundRichLocation.setCrossRefResolver(CrossReferenceResolver r) Sets the cross ref resolver to use when retrieving remote symbols. If none is given, then the default from RichObjectFactory.getDefaultCrossRefResolver() is used. Recursively applies this call to all members.