geneIDs {ballgown} | R Documentation |
get gene IDs from a ballgown object
geneIDs(x) ## S4 method for signature 'ballgown' geneIDs(x)
x |
a ballgown object |
This vector differs from that produced by geneNames in that geneIDs produces names of loci created during the assembly process, not necessarily annotated genes.
named vector of gene IDs included in the ballgown object. If object was created using Tablemaker, these gene IDs will be of the form "XLOC_*". Vector is named and ordered by corresponding numeric transcript ID.
data(bg) geneIDs(bg)