extract the indexes from ballgown objects

Description

extract the indexes from ballgown objects

Usage

indexes(x)

## S4 method for signature 'ballgown'
indexes(x)

Arguments

Value

list containing elements e2t, i2t, t2g, bamfiles, and pData, where e2t and i2t are data frames linking exons and introns (respectively) to transcripts, t2g is a data frame linking transcripts to genes, and bamfiles and pData are described in ?ballgown.

Examples

data(bg)
names(indexes(bg))
class(indexes(bg))
head(indexes(bg)$t2g)