![](snps.png)
called snp type summary for Q(snp) >= 20
name | ref het | nonref het | total het | total hom | het/hom ratio | total snps |
---|---|---|---|---|---|---|
phi | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_850bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_850bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_850bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_823bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_750bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_750bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_750bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_723bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_650bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_650bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_650bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_623bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_550bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_550bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_550bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_523bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_450bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_450bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_450bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_423bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_350bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_350bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_350bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_323bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_250bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_250bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_250bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_223bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE2_150bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTA_150bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTL_150bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CTE1_123bp | 0 | 0 | 0 | 0 | 0.00000 | 0 |
TAGSET1 | 0 | 0 | 0 | 0 | 0.00000 | 0 |
CONTROL_INDEX | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_CAGATC | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_ACAGTG | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_GCCAAT | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_GATCAG | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_TTAGGC | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_ATCACG | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_TAGCTT | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_CGATGT | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_ACTTGA | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_CTTGTA | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_GGCTAC | 0 | 0 | 0 | 0 | 0.00000 | 0 |
SAMPLE_INDEX_TGACCA | 0 | 0 | 0 | 0 | 0.00000 | 0 |
Total | 0 | 0 | 0 | 0 | 0.00000 | 0 |