CASAVA-1.8.2 SE DNA-Seq coverage for all reference sequences
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CASAVA-1.8.2 SE DNA-Seq - analysis: coverage for all reference sequences

mean depth at known sites

fraction of known sites mapped

namesitesknown sitesbases mapped at known sitesmean depth at known sitesfraction of known sites mapped
phi 5386 5386 2133 0.39603 0.24137
CTL_850bp 850 850 0 0.00000 0.00000
CTA_850bp 850 850 0 0.00000 0.00000
CTE2_850bp 850 850 0 0.00000 0.00000
CTE1_823bp 827 827 0 0.00000 0.00000
CTE2_750bp 750 750 0 0.00000 0.00000
CTA_750bp 750 750 0 0.00000 0.00000
CTL_750bp 750 750 0 0.00000 0.00000
CTE1_723bp 727 727 0 0.00000 0.00000
CTL_650bp 650 650 0 0.00000 0.00000
CTE2_650bp 650 650 0 0.00000 0.00000
CTA_650bp 650 650 0 0.00000 0.00000
CTE1_623bp 627 627 0 0.00000 0.00000
CTE2_550bp 550 550 0 0.00000 0.00000
CTL_550bp 550 550 0 0.00000 0.00000
CTA_550bp 550 550 0 0.00000 0.00000
CTE1_523bp 527 527 0 0.00000 0.00000
CTE2_450bp 450 450 0 0.00000 0.00000
CTA_450bp 450 450 0 0.00000 0.00000
CTL_450bp 450 450 0 0.00000 0.00000
CTE1_423bp 427 427 0 0.00000 0.00000
CTA_350bp 350 350 0 0.00000 0.00000
CTE2_350bp 350 350 0 0.00000 0.00000
CTL_350bp 350 350 0 0.00000 0.00000
CTE1_323bp 327 327 0 0.00000 0.00000
CTE2_250bp 250 250 0 0.00000 0.00000
CTA_250bp 250 250 0 0.00000 0.00000
CTL_250bp 250 250 0 0.00000 0.00000
CTE1_223bp 227 227 0 0.00000 0.00000
CTE2_150bp 150 150 0 0.00000 0.00000
CTA_150bp 150 150 0 0.00000 0.00000
CTL_150bp 150 150 0 0.00000 0.00000
CTE1_123bp 127 127 0 0.00000 0.00000
TAGSET1 13 13 0 0.00000 0.00000
CONTROL_INDEX 7 7 0 0.00000 0.00000
SAMPLE_INDEX_CAGATC 6 6 0 0.00000 0.00000
SAMPLE_INDEX_ACAGTG 6 6 0 0.00000 0.00000
SAMPLE_INDEX_GCCAAT 6 6 0 0.00000 0.00000
SAMPLE_INDEX_GATCAG 6 6 0 0.00000 0.00000
SAMPLE_INDEX_TTAGGC 6 6 0 0.00000 0.00000
SAMPLE_INDEX_ATCACG 6 6 0 0.00000 0.00000
SAMPLE_INDEX_TAGCTT 6 6 0 0.00000 0.00000
SAMPLE_INDEX_CGATGT 6 6 0 0.00000 0.00000
SAMPLE_INDEX_ACTTGA 6 6 0 0.00000 0.00000
SAMPLE_INDEX_CTTGTA 6 6 0 0.00000 0.00000
SAMPLE_INDEX_GGCTAC 6 6 0 0.00000 0.00000
SAMPLE_INDEX_TGACCA 6 6 0 0.00000 0.00000
Total 21294 21294 2133 0.10017 0.06105

Added by CASAVA, last edited by CASAVA on 18-10-11


 
Version 1.0 (22:44:58 18-10-11)
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