birch - cuffquant


cuffquant - Quantify gene and transcript expression in RNA-Seq samples
Launching the program
command
cuffquant [options] <transcripts.gtf> <sample1_hits.sam> <sample2_hits.sam> [... sampleN_hits.sam]
Documentation
Manual
$doc/ccb/cuffquant.man
Data
Sample input
Sample output
Package: CCB
Platforms: linux-x86_64