Hierarchy For Package org.biojava.bio.program.ssbind

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • org.biojava.bio.program.ssbind.AlphabetResolver
  • org.biojava.bio.program.ssbind.AnnotationFactory
  • org.biojava.bio.program.ssbind.BlastLikeSearchBuilder (implements org.biojava.bio.search.SearchBuilder)
  • org.biojava.bio.program.ssbind.SeqSimilarityAdapter (implements org.xml.sax.ContentHandler)
  • org.biojava.utils.stax.StAXContentHandlerBase (implements org.biojava.utils.stax.StAXContentHandler)
    • org.biojava.bio.program.ssbind.SeqSimilarityStAXAdapter
    • org.biojava.bio.program.ssbind.SeqSimilarityStAXHandler
      • org.biojava.bio.program.ssbind.AlignmentStAXHandler
      • org.biojava.bio.program.ssbind.HeaderStAXHandler
      • org.biojava.bio.program.ssbind.HitStAXHandler
      • org.biojava.bio.program.ssbind.HSPStAXHandler
      • org.biojava.bio.program.ssbind.HSPSummaryStAXHandler
  • org.biojava.bio.program.ssbind.StAXHandlerBinding
  • org.biojava.bio.program.ssbind.ViewSequenceFactory
    • org.biojava.bio.program.ssbind.BlastLikeHomologyBuilder (implements org.biojava.bio.search.SearchContentHandler)
    • org.biojava.bio.program.ssbind.SimilarityPairBuilder (implements org.biojava.bio.search.SearchContentHandler)

Interface Hierarchy

• org.biojava.bio.program.ssbind.StAXHandlerFactory