Uses of Interface
org.biojavax.bio.seq.PositionResolver

Packages that use PositionResolver

org.biojavax	The Biojava extensions packages, classes that extend the core biojava functionality
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.

Uses of PositionResolver in org.biojavax

Methods in org.biojavax that return PositionResolver

static PositionResolver

RichObjectFactory.getDefaultPositionResolver() Returns the default position resolver object.

Methods in org.biojavax with parameters of type PositionResolver

static void

RichObjectFactory.setDefaultPositionResolver(PositionResolver pr) Sets the default position resolver to use when creating new rich feature locations.

Uses of PositionResolver in org.biojavax.bio.seq

Classes in org.biojavax.bio.seq that implement PositionResolver

static class	PositionResolver.AverageResolver The minimal resolver returns the base which provides the average range, halfway between maximal and minimal.
static class	PositionResolver.MaximalResolver The maximal resolver returns the base which provides the largest possible range.
static class	PositionResolver.MinimalResolver The minimal resolver returns the base which provides the smallest possible range.

Methods in org.biojavax.bio.seq with parameters of type PositionResolver

void	SimpleRichLocation.setPositionResolver(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.
void	RichLocation.setPositionResolver(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.
void	EmptyRichLocation.setPositionResolver(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions. This method is ignored in the empty location because positions are fixed an cannot be modified.