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Module: Coalescence in Current Tree with Migration

Full package name: mesquite.coalesce.CoalescenceWMigration.CoalescenceWMigration
Duty: Tree Simulate (mesquite.lib.duties.TreeSimulate)

Module Explanation

Generates tree by a simple coalescence model of a neutral gene with constant population size, within a current species tree from a Tree window or other tree context. Branch lengths are assigned according to generation of coalescence. The default population size is 10000. The species tree used is a current tree found in a Tree Window or other tree context. Migration is allowed; the default probability is 0.00001 per individual generation. Migration can be isolated to a particular generation, or spread throughout the depth of the species/population history.

Commands of Coalescence in Current Tree with Migration