ManualModules LoadedModule scripting commandsGeneral scripting commandsScripting

Module: Likelihood Ancestral States

Full package name: mesquite.stochchar.MargProbAncStates.MargProbAncStates
Duty: Assign states of character to nodes (mesquite.lib.duties.CharStatesForNodes)

Module Explanation

Coordinates reconstruction of ancestral states by maximum likelihood. Currently each node is estimated independently (i.e., corresponding to PAUP's marginal reconstruction).

Commands of Likelihood Ancestral States