Full package name: mesquite.coalesce.NeutralCoalescence.NeutralCoalescence Duty: Coalescence simulator (mesquite.coalesce.lib.Coalescer)
Module Explanation
Performs neutral coalescence within a population by a simple model of a neutral gene with constant population size.Remembers a tree of nodes, with branch lengths assigned according to generation of coalescence. The default population size is 10000.
Author(s): Wayne P. Maddison and David R. Maddison
Version 3.70
Commands of Neutral Coalescence
setEffective
Explanation: Sets the effective population size for coalescence simulations
Parameters: [effective population size]
toggleExponential
Explanation: Sets whether to use the exponential approximation or to simulate full population with individual genes
Parameters: [on = use exponential approximation; off]
