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Module: Shared History Distances (Covariance matrix) from Tree

Full package name: mesquite.distance.SharedHistoryDistance.SharedHistoryDistance
Duty: (mesquite.distance.lib.IncTaxaDistanceSource)

Module Explanation

Distances among taxa implied by length of shared history (distance from root to most recent ancestor). This is the most common Covariance/Variance matrix used in GLS methods. Unassigned branches are treated as of length 1.0.

Commands of Shared History Distances (Covariance matrix) from Tree