Manual Modules Loaded Module scripting commands General scripting commands Scripting

Module: Simulated Matrices on Trees

Module Explanation

• Author(s): Wayne P. Maddison and David R. Maddison
• Version 3.70

Commands of Simulated Matrices on Trees

• setCharacterSimulator
  • Explanation: Sets the module used to simulate character evolution
  • Parameters: [name of module]
• setSeed
  • Explanation: Sets the random number seed to that passed
  • Parameters: [long integer seed]
• setTreeSource
  • Explanation: Sets the module used to supply trees for matrix simulation
  • Parameters: [name of module]
• setNumChars
  • Explanation: Sets the number of characters simulated in each matrix
  • Parameters: [number of characters]
• setNumMatrices
  • Explanation: Sets the number of matrices (if indefinite number allowed)
  • Parameters: [number of matrices]
• setTaxa
  • Explanation: Sets the block of taxa used
  • Parameters: [block number]
• getTree
  • Explanation: Returns the current tree
• nextMatrix
  • Explanation: Simulates the next matrix
• prevMatrix
  • Explanation: Simulates the previous matrix
• setMatrix
  • Explanation: Sets which character matrix to simulate
  • Parameters: [matrix number]
• logLastResultString
  • Explanation: Logs last result string
• getLastResultString
  • Explanation: Returns last result string
• getLastResult
  • Explanation: Returns last MesquiteNumber result